Salvelinus namaycush (lake trout): 120044703
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Entry
120044703 CDS
T07522
Symbol
rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1
KO
K14946
RNA binding protein fox-1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120044703 (rbfox1)
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120044703 (rbfox1)
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
120044703
NCBI-ProteinID:
XP_038845309
UniProt:
A0A8U0UAS5
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All DBs
Position
Sna3:complement(89674903..89729272)
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AA seq
279 aa
AA seq
DB search
EEESQTDSQQQSQSSDSSNSKTQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE
RGSKGFGFVTFEHSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYANGWKLN
PVVGAVYSPEFYAVPGFPYTAASAAVAAYRGAHLRGRGRTVYNTFRAAAPPPHIPTYGGV
VYQDGFYGADIYGGYAAYRYAQPAAAAAAAYGDSYGPVYAADPYNHPLAPAATYSIGAMN
AFAPLADAKTRSHADDVGLVLSSLQASIYRGGYSRFAPY
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
gaggaggagtctcagacagacagtcagcagcagagccagtcgtctgacagttctaacagt
aagactcaacccaagcgactacatgtctccaacatacccttccggttcagggatccagac
ctcaggcaaatgtttggccaatttggtaaaatcttagacgttgaaatcatttttaacgag
cggggctctaagggttttgggttcgtaactttcgagcacagtgcggacgctgacagggcg
cgagaaaaattacacggcacggtcgtagaaggccgtaaaatagaggtcaacaatgcaaca
gcacgggtaatgaccaataagaagacggtcaatccttatgcaaatgggtggaagttgaac
ccagtagtcggtgcagtctacagtccagagttctatgcagtaccgggcttcccctacaca
gcagccagtgcagcggtggcggcttacagaggggcccatctaagaggtcgagggcggacg
gtctacaacacattcagagcagccgcacccccacctcacatccccacatacggaggtgtt
gtgtaccaggatggattttatggtgcagatatttatgggggctatgctgcctacaggtat
gcccagcctgctgctgccgcagctgctgcatacggtgacagttacggaccagtatatgct
gcggacccctacaaccacccacttgctccagcagccacatacagcattggtgccatgaat
gcgtttgccccgttggctgatgccaagacgaggagtcatgctgacgacgtggggctggtg
ttgtcctccctgcaggctagtatatacaggggaggttacagccgcttcgccccatactaa
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