Salvelinus namaycush (lake trout): 120046405
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Entry
120046405 CDS
T07522
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120046405
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120046405
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
Motif
Other DBs
NCBI-GeneID:
120046405
NCBI-ProteinID:
XP_038847538
UniProt:
A0A8U0QQT5
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Position
Sna4:complement(26950595..26990351)
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AA seq
475 aa
AA seq
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MLMSTDVASIMLPVSRGMMDREKDIDTATGPHANTTGGPAAIVRGMKRGDPEQTAAVLTE
LTGAECKRPRIDGTVGVGDIGQNNDPLTPGFLGYPPHSQGSQDSTGGQEGLVPPPFSAFP
PPPPPQNGLGTEFVGALFGASGQGPSDSGAGTNGSAATSNILPSPQTEVSPGQVDGVGQC
VAVELAGGVSGADSAEAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKIIDVEIIFNERGS
KGFGFVTFETSADAEKARERLHGTLVEGRKIEVNNATARVMTNKKMVSPYPNGEALSTLP
YAGWKLSPMVQAMYGPELYAVPGFPYPSAAAAASTAAAFRGAHLRGRGRPVYSAVRAAMP
QPALPAYPGVVYQDGGFYGAADLYGGYPAAAYRFAQPTAVTGATAAAAAAAYSDSYGRVY
TTDPYHALGPAAAAYGVGAMVRAPQPQHYNNRLETELSSLYASLYRAGYSRFAPY
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgtcgcatccataatgttacccgtttctcggggaatgatggac
cgggaaaaggacattgatacagcaactggaccccacgcgaacacgaccgggggtccagca
gcaatagtccggggaatgaaacgaggggatcctgagcaaacagctgcagttttgaccgaa
ttaacaggagcagagtgcaaacggccaaggatagacgggacggtgggtgttggtgacatt
ggacagaacaacgaccctttaaccccaggtttccttggatacccacctcacagccagggt
tctcaagattcaacggggggccaggaggggctggtgcccccgcccttctcagcgttccct
ccaccaccccctccgcagaatggcctggggacagagtttgtcggtgctttgtttggtgct
agtggacaggggccttcggattcaggggctggaacaaatggctcagccgccacttccaac
atcttacccagcccgcagacagaagtgtctccaggtcaggtagatggagtggggcagtgc
gtggcagtagaattagcaggaggagtatccggggctgactccgcagaggccaaaggaacc
ccaaaacgacttcacgtctccaacatccccttccgcttccgagaccctgacctcaggcag
atgtttgggcaatttgggaagattattgatgttgagatcattttcaatgagaggggctca
aagggctttggctttgtcacgtttgagaccagcgccgacgcggagaaagcccgggaaagg
cttcacggcacgctagtggaaggtcgcaagatagaggttaacaatgcaacggccagggtg
atgaccaataagaagatggtcagcccctaccccaacggagaggcccttagcaccctgcca
tatgcagggtggaagctaagcccaatggtgcaggccatgtacggaccagagctctatgca
gttccagggttcccctacccgtctgcggcagcggcagcctccacagcagcagcgttccgt
ggtgcccaccttaggggccggggaaggccagtgtacagcgcggtgcgtgcagcgatgcca
cagcctgccctccctgcctaccctggcgtggtgtatcaggatggtgggttttatggagct
gcagacttatacggaggctatcctgccgctgcctatcgctttgctcagcctactgctgta
accggggcaactgctgccgccgcagctgctgcttacagtgacagttatgggcgagtgtac
actacagatccctaccacgctctaggtcctgctgccgctgcctatggagtcggtgccatg
gtaagagccccccagccgcaacactacaacaacaggctggaaactgagttatcttcactt
tatgctagtttatatcgggctggatacagtaggtttgctccgtactaa
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