Salvelinus namaycush (lake trout): 120046792
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Entry
120046792 CDS
T07522
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47-like isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120046792
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120046792
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120046792
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120046792
Ubiquitin system [BR:
snh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120046792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
120046792
NCBI-ProteinID:
XP_038848232
UniProt:
A0A8U0QRN2
LinkDB
All DBs
Position
Sna1:complement(62392774..62414630)
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AA seq
1374 aa
AA seq
DB search
MEMVPSEENQLVPKEIENAAEEPRVLCIVQDTTNAKTVNERLTLNLPASTTLSKLFEDVA
HKASYVNGTFDLAWGKSGDMGSLDPSSEMSLTESGFEPGKRNFLQLTDKDGEQPQIASDE
SGTAGSSGLDDSSQERFIGPLPRDGAVGCSSDYSSPSYSYSSILNKSDTGYVGLVNQAMT
CYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQLQRLFLLLQTSKKRAIETTDV
TRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECGY
ESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFVQPETLDGANQYFCERCKKKCDARKG
LRFLHFPYLLTLQLKRFDFDYSTMHRIKLNDRMSFPEELDMGPFIDVEDEKSPQTESCTD
SGAENEGSCHSDQMSNDFSADDGVDEGICLDSASSTERVLKPKVPSLNTSSLTFELFSVM
VHSGSAAGGHYYACIKSFSDGQWYSFNDQHVSKITQEDIRKTYGGSSGSRGYYSSAFASS
TNAYMLIYRLKDPSRNAKYLDCDDFPEHIKHLVQREKESEEQEKRQREIERNTCKIKLFC
MHPVKMMAMMENKLDVHKDKTLREATEMAYKLMELDGVVPLDCCRLVKYDEFHEYLERSY
EGEDDTPMGLLLGGVKSSYMFDLLLETRRPEQVFQPYKPGEVMVKVHVVDLKTHTITPPV
SIRAYLNQSITEFKQLIAQATELSAETMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKV
FVESSESPDHQVTFTDSLLWKLLDRHGNTIRLFVSLPVQSPGTNRTICQKVGGDTEECSE
GSKGNRNSVEAILEESTEKLKNLSLQQQQGSSTSDSQKSSDTSDFEHIESPSPSQEPDSS
SVSAVVAVDNRELENRIRAASGGSGGGAYSDPETQFPGEERSDSEVNNDRSTSSVDSDIL
SSSHSSDTLCNADSGPIQLANGLDSHSITSSRRSKANEGKKETWDTAEEDSGTDSEYDEN
GKSKTESYYLYFRAEPYAQEDGSGEGGQKCVLVNVDKRITLSAFKQNLEPFVGVTSTQFK
VFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNDAEPCKFL
VDTVFAKGMTVKQSKEELMPQLKDQCKLDLNIHKFRLRKKTWKNPGTVFLDYHVYEEDIN
ISSNWEVFLEVLDGPEKMKSMSQLAVLTRRWTPAQMKLEPFQEVVLESSSVEELKEKLSE
ISGIPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVVFYRDST
EEPMEQSEDERNELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPVKDPGQD
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaagagaaccagctcgtaccgaaagagatagagaatgccgca
gaggagcccagagtgctgtgcatagtccaggacactaccaatgctaagacggtcaacgag
aggctcaccctcaacctgccagcctccactaccctctccaaactctttgaggatgtggcc
cacaaggcgagctatgtgaacggcacctttgacctggcatggggcaagtccggggacatg
gggtcgctggatcccagcagtgagatgtccctcactgagtctgggtttgagcccgggaag
aggaacttcctccagctcacagacaaggacggagaacagcctcagattgcgtcggatgag
tcggggacagcgggcagcagtggtctggatgacagctcccaggagcgcttcatcggcccg
ctgcccagagacggcgcggtgggctgcagcagcgactacagcagccccagctactcctac
tcctccatcctcaacaaatctgacacaggatatgtgggtttggtgaaccaggccatgacc
tgctatttgaacagccttctacaaactctgtttatgaccccggagttcagaaatgcattg
tacaactgggaatttgaggagtccgaggaagacccggtcaccagcatcccttaccagcta
cagaggctgtttttgctgctgcagaccagtaagaagagggccatcgagaccaccgacgtg
actcgcagcttcggctgggacagcagcgaagcctggcagcagcatgacgtccaggagctg
tgtagggtcatgtttgatgccctggagcagaaatggaagcagacagagcaggctgacctg
attaaccagctgtaccaggggaagctgaaggactatgtgcgctgtctggagtgtggctat
gagagctggaggatcgacacctacctggacatccctctggtcatcagaccctttggggcc
agccaggcttatggcagcgtggaggaggctctgcaggccttcgtccagccagagactctg
gacggggccaaccagtatttctgtgagcgctgcaagaaaaaatgtgacgcccgtaagggg
ctgaggtttctgcactttccctacctgttgactttgcagctgaagcgttttgactttgac
tactccactatgcaccgcatcaaactcaacgaccgcatgtccttccctgaggagctggac
atgggtcctttcatcgacgtggaggacgagaaatctcctcaaacggagagctgcactgac
agcggggcagagaatgaaggcagttgccacagtgaccagatgagcaacgacttctcggcg
gacgacggtgtggatgagggcatctgcctggacagtgccagcagtactgagagggtcctg
aagccaaaggtacccagcctcaacactagttcattgacctttgagctgttctcggtcatg
gtccattcgggcagcgctgcaggtggccactactatgcctgcattaagtccttcagcgat
ggccagtggtacagtttcaacgaccagcacgtcagcaagatcacccaggaagacatcagg
aaaacgtatggagggtcctctgggagcagaggctattactccagtgcctttgccagctct
acgaatgcgtatatgctgatttataggttgaaagacccctctaggaatgcaaagtatctg
gattgtgatgacttccctgagcacataaagcatctggtccagagggagaaggagtctgag
gagcaggagaaaagacagagggagatcgagcgtaatacctgcaagatcaagctgttctgc
atgcatccggtgaagatgatggctatgatggagaacaagctggatgtgcacaaggacaag
acgctcagagaggcaacagagatggcctacaagctcatggaactggatggggtggtcccg
ctggactgctgtcgtctggtcaagtacgatgagttccatgagtacctggagcgctcgtac
gagggcgaggacgacacccccatggggctgctgctgggcggggtcaagtcctcctacatg
tttgacctgctgctggagacccgcagaccagaacaagtcttccagccatacaaacccgga
gaggtgatggtgaaggttcacgtggtggatctgaagactcacactatcacccctcccgtc
agcatcagggcctatctaaaccagtcaatcactgagttcaagcagctcattgcacaggcc
acagagctctcagccgaaaccatgcgtgtcgtcctggagcgctgctataatgaccttcgg
cttctctacgtgcccaacaagacactgaaagcagagggtttcttcaggagcaacaaggtt
tttgtggaaagctctgaatccccagatcaccaggtcaccttcactgattccctcttgtgg
aaactgctggatcgccatgggaacacaatccgcctgtttgtctcgctgcctgtgcaatcc
cccggcaccaacagaactatttgccaaaaagttggcggcgacactgaggagtgctctgag
gggtcaaagggtaacaggaattctgtagaggccatcctggaggagagcacagagaagctg
aagaacctgtccctccagcagcagcagggctccagtaccagtgacagccagaagagctca
gacaccagcgacttcgagcacatcgagtccccctcaccctctcaggaaccagactcctcc
tctgtatctgctgtcgttgcagtcgacaaccgagagctggagaaccggatccgggcggcc
agcgggggaagcggcgggggggcctactctgacccggaaacccagttccctggggaggag
cgctcagactctgaggtgaacaacgaccgcagcacgagctcagtggacagtgacatcctg
agctccagccacagcagtgacacgctgtgcaacgccgacagcggccccatccagctggcc
aatggcctggactcacacagcatcaccagcagccgccgctccaaggccaacgagggcaag
aaagagacatgggacacagccgaggaggacagtggcacggacagcgagtatgacgagaat
gggaagagcaagacggaatcctattacctctacttcagagcagaaccatatgcacaggag
gacggctctggggaaggaggccagaaatgtgtactggtcaacgtggataagaggataact
ctgtcagcgttcaaacagaacctggagcctttcgtgggggtcacctctacccagttcaaa
gtgttccgcgtctacgccaacaaccaggagtttgagagtgtacggctcaacgagaccctc
tcctccttctctgacgacaacaagataaccattcgattaggcagagcactgaagaagggc
gaatatcgggtgaaagtgtaccagctactagtgaatgatgcagagccctgtaagttcctt
gtggacacagtgtttgctaagggcatgactgtgaaacagtccaaagaggagctaatgcct
cagctgaaagaccaatgcaagctggacctcaacatccacaagttccgtctcaggaagaag
acgtggaagaacccagggacagtgtttctggactaccacgtctacgaggaggacatcaac
atctccagtaactgggaggtctttctggaggttctagatggaccggagaagatgaagtcc
atgtcccagctggctgtgctgacccgccgctggacccccgcccagatgaagctggagccc
ttccaggaggtggttctggagagcagcagtgtggaggaactcaaggaaaagctcagtgaa
ataagtggtattcctcttgaaaacctggagtttgccaaggggcgcggaacatttccttgt
gatatctcggtattggagatccatcaggatctggactggaaccctaaagtgtccactctg
aatgtgtggcctctgtacatctgtgatgatggtgctgtggtcttctacagggacagcaca
gaggagcctatggaacagtctgaagacgaacgcaatgagctgatgaagaaggagagcagc
cgcctgctgaagactggccaccgggtcagttactcacctcgtaaggagaaggcccttaag
atctacctggatgggggcccggtcaaggacccggggcaggactga
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integrated database retrieval system
