Salvelinus namaycush (lake trout): 120048247
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Entry
120048247 CDS
T07522
Name
(RefSeq) transcription factor HIVEP3-like isoform X1
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120048247
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120048247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
NOA36
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
120048247
NCBI-ProteinID:
XP_038849989
UniProt:
A0A8U0UF72
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All DBs
Position
Sna5:complement(38330088..38418558)
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AA seq
2042 aa
AA seq
DB search
MEAEPSHPADGERSGRQQQPLSAGAAESPTGSCPPQPQQPPSIPRPVHGGLGRLHHRKPK
RSDLLLRLQHQHKTQAAAWQLSTDTPGPSGGSISSPSTSSLQSSSTQGHNTQGVQSQPNQ
EAPEGSPSKRSERKPQKPGKYVCTYCGRPCAKPSVLQKHIRSHTGERPYPCVPCGFSFKT
KSNLYKHRKSHTHRIKAGLASSRDELSLSGPAMSAPGEDPEEPTEGESTDSESSSGQYRK
ERLGKQKSSSSLALLGQEEGQRSDNSQAVKQRLAMRLSERKRGPMASPEDPPSSSTSSSL
GPSSKGSQESGYFSLSRSTEMSRADSQVSPPTAKTYAEIILGKYGRLGGQQRGPHHQHAH
SSPGMEEKSSMPFSVPKTQVIEHITKLITVNEAVVDTSEIDSVKPRRSSLSRKSSLELPK
FSCPKDPYMFEPKGESPSSSMAGQSFFPHVQDVDPSGVQESSSSVPLLRSHSMPTSASQG
NHSTTSPWGFCRLSHSFDEQQAVVAEMRVGGQHRLLRRQPAIEVPLGAELSLEEAGPSYA
ATESGLTRKQQQQQHKGPRLYECKARCKQRESYEAHRGLCTGQPIKELERGEVDGACRDD
RPQMMHYKFRALAMAVRKRRKEESLEEDPPSPGPTAVVTCSPATTTAVPSLVEQSEDFSG
ALSQAEQQQQDRKGISVIQHTSSFEKQESISMESQESIELSESQSTLQKQPQPKSSRSMS
RLVRQHNIQVPEILVTVEPDADMVSVSPTATASSSKEPERVVEEFQWPQRSQSMAQLPAE
KLPPKKKRLRLAEAAAQSSGESSFESVLLGPRSPSQESNISHSPSRSASFEDMGGKPAEP
SSWGSSSTQGSHMLTVPSGPHQQYQPQRDMRRSASEQAPASPQHTDEVVETRSKSFDYGS
LSPQRSASAWRERRKCLLVKHATLGEPDHEEGAVASHSGRPGSPKPGPSYTSHPALHPAE
ASTSRLSPEAIGKTVQLFHQPRIPPFPMQPTGHDRFPLGQIAQLHPVTTAISDVLSTHII
HRAFLHTHPSPPTIQVHPGQLHMAECLGLPLDPFSALLSLQYPTGAGETVYLPISPGLTI
QVPTQPPIPSTVVLPSPSPQSLIPLPCLHPPPVIATCLAQLMPVVSLVVPVRLQTHMTTY
ASALYTTLSQILASACSQEPICCMAMVIMGQLEQDKLQRSYLKIPTPDFKSYLPLSLPLE
LGSVSREGYGPLGAGGSKRMLSPAASLELSTEAQRQQKRVKEEEEEEEKVGEEEENRGTG
GEPEAGEDEEKQPERAQIGVVTVKAEEEEKVRDPEGHMEEREMQGKAEPKKEKGREKNES
RGVSASFVTQSPERAKAPSYTSLHTTTSVSWCYLNYAKPNPSAQRESQTSVYTSWSVSMH
NPNLPGLSTKLALSLLSSKQKHSSETYTMATALTPATGKVVSASSRKTYISEVHAIPPST
PVEVKEPPQQPEKGKREEQGPSTSKQSEPLRVKILEGGYKSNEEYVYVRGRGRGNYVCGE
CGIRCKKPSMLRKHIRTHTDLRPYICKHCNFAFKTKGNLTKHMKSKAHGKKCQSMGTSGS
SLDEPETEEAGVAWRTGVWRIRHSVSFPLFSSGGIEEHLSGSEDQDEHQFSDVDDSEEDD
DEEEEESSSHDELPSSCSSDRSLSARGHSSSGRRSQQGTPDPSAPELQPDPSPCPSQELS
PSRRMWPSGHTSSPESRRALFSRRGWDASPRAFSPSSESCSPIRSLSPRRELASHNRHLS
PSPKRGPSPIRALSPLYPMRPLSPSQYRVLWARASPSPLGVQHRPRSSPSRLPWDIPSMM
ASDRRQVGSMERIGTPSEGQIGPEPCLSFPPAFRLSPSDSPKAQSQSMDRIFSHLPLHSQ
QARVPYLMISIGGIQMVQARPRSHPTTPTLASSPPMEGLLLGQTRREAPWCRTPRTQGLR
TPGDHWSDSQEVVGASQSGLCIPSLTPPIHSKPSTSQQGRMDPGMINTKQYHSSSHSHRS
EAETRERWPSHGQAGPSPPPTHRIGQLFERQEPPGLGSRATVSELVERGSKGGDSTNQDQ
ST
NT seq
6129 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggagcccagccatcctgctgatggtgagcgatccggaaggcaacagcagcct
ctgtctgctggggccgctgagtcccccacagggtcctgtccacctcagccacagcagccg
ccatccatcccccgccccgtccacggtggcctgggacgcctccaccaccgcaagcccaag
cgtagcgacctgctcctcaggcttcagcatcagcacaagacccaagcagcagcatggcag
ctctcaacagacaccccaggtccttcaggaggcagcatctcctccccctccacctcatcc
ctacaatcctcctctacccaaggccacaacactcagggggtccagtcccagcccaatcag
gaagccccagagggcagcccgtctaaaagaagtgagaggaagccccagaaaccggggaag
tatgtgtgcacttactgcggccgtccatgtgccaaacccagcgttctccagaaacacatc
cgctctcacacaggggagaggccttacccctgtgtcccctgtggcttctccttcaagacc
aagagtaacctgtacaagcaccgcaagtcccacacccaccgaatcaaggcaggcctggcg
tccagccgggacgagctgagcctgagcggacctgcaatgagcgccccgggagaggatccc
gaggagcctacagagggggagagcacagactctgagtcgtcgtcaggtcagtacaggaag
gagaggttgggcaagcagaagagtagcagcagtttggcgctgttagggcaagaggagggc
cagaggtctgacaactcccaggccgtgaagcagagactggccatgaggctgagtgagagg
aagcgaggccccatggcctccccagaagaccctccctcctcctccacctcctcctcacta
ggccccagcagtaaaggcagccaagagtcaggctacttctccctttcgaggagcactgag
atgagccgagctgactcccaggtgagccctcccaccgccaaaacttacgccgagatcatc
ctgggcaagtatggacggcttggagggcagcagcgcggtccccatcatcagcacgcccac
tcttcaccagggatggaggagaagagcagcatgcccttcagcgtgcccaagacgcaggtc
atcgagcacatcaccaaactcatcaccgtcaacgaggcggtggtggacaccagcgagatc
gacagcgtcaagcccaggcgctcctcgctctccaggaagagtagtctggagttacccaag
ttctcctgccccaaagacccctatatgtttgagcctaagggagaaagtccaagctccagt
atggcaggccaatcattctttccccatgtccaagacgtggacccatctggggtccaggag
tcttcctcctcagtgcctctgctgagaagccactccatgcccacctcagcaagccaggga
aaccactccaccacctctccctggggcttctgtcgtctgagccactcctttgatgagcag
caggctgtggtggccgagatgagggtgggcgggcagcaccgtttgctgaggcgccagccc
gccatcgaggtgcccctcggggctgaactcagcctggaggaggctggcccctcctacgca
gcaacagaaagtggcctaaccaggaagcagcaacagcagcaacacaaaggtccaaggctc
tatgagtgcaaggcccgctgtaaacaaagggagagttacgaggcccacaggggtctttgc
acaggccagccaataaaggagctggagagaggagaggtggatggggcgtgccgggatgac
cgtccccagatgatgcactataaattccgggcactggccatggcagtgaggaagaggagg
aaagaggagagtctggaggaggatcctcccagccccgggcctacagctgttgtgacctgc
agccccgcaaccaccactgcagtgccaagcctggtggagcagagtgaggatttctcaggt
gctctctcacaggctgagcaacagcagcaagacaggaagggcatctctgtcatccagcac
accagctccttcgagaagcaggaaagtatatccatggagagccaggagtctatagagctc
agtgagagccagtcaacactgcaaaaacagccgcagccaaaatcatctcgctccatgtcc
cgcctggtccgccagcacaacatccaagtgccagagatcctagtgacggtggagcctgac
gctgatatggtgtcagtgtcgcccacggcgacggcatcctcgtccaaggagccagagaga
gtggtagaggagttccagtggcctcagcgcagccagagtatggctcagctccccgccgag
aagctgccaccaaagaagaagcgtctccgtctagccgaggctgctgcccagtcttctggg
gagtccagctttgagtcggtattgctggggccccggagccccagccaggagagcaacatt
tcccactcacccagccgatctgcctcctttgaagacatggggggaaaacctgctgagcct
tcctcctggggctccagcagcacccagggctcccacatgctaaccgtgccctcgggcccc
caccaacaataccaaccccaaagagacatgcggcgctcagcctcggagcaggcccctgcc
agcccacagcacacggacgaggttgtggagacgaggagcaaatcctttgactacgggtcc
ctatcgccgcagcggtctgcatcagcctggagggagaggaggaagtgcctgctggtgaag
cacgccaccctgggcgagccagaccacgaggagggggccgtggccagccactcgggccga
ccagggagccccaagccgggcccgtcctacaccagccaccctgccctccacccagctgaa
gccagcacctcgaggctcagcccagaggccatagggaagaccgtacagctgttccaccaa
ccccggatacccccattccccatgcaaccaactgggcatgatcggttccctcttggccag
atagcccagctccacccggtcaccactgccatctcagatgtcctctccacccacatcatc
cacagagccttcttacacacacacccttctcctccaaccatacaagtccacccagggcag
cttcacatggcagaatgcttaggcctgcccctcgatcctttctcagctctgctctccctg
cagtaccccaccggggctggcgagactgtgtacctccccatttcccctgggctcaccatc
caagtccccacacagccccccataccctccactgtggttctcccttccccatctcctcag
tccttaatccccctaccctgcctccatcccccgcctgtcatcgcaacgtgcctggcgcag
ctgatgccagtcgtgtcactggtggtgccagtgcgcctccagacccacatgaccacctat
gccagtgccctgtacaccaccctatcccagatcttggcgtcagcctgctcccaggagccc
atctgctgcatggccatggttatcatgggccagctggagcaggacaagctgcagaggtcc
tatctgaagatccccaccccggacttcaagagctacctgcctctgtctctgcccctggag
ctgggctctgtgtccagggagggctacgggccactgggggctggagggagcaaacgcatg
ctctcccctgcagccagtctggagcttagcacagaggcccagcgccagcagaaacgagtg
aaggaggaagaggaggaggaagagaaggtgggagaggaagaggaaaataggggtactggg
ggagaacctgaagcaggggaggatgaagagaagcagccggaaagggcacagataggagta
gttactgtgaaagccgaggaggaagagaaggtacgggacccagaggggcacatggaagag
agggagatgcaagggaaggctgaacctaagaaagaaaaggggagggagaagaatgagagc
cggggagtgagtgcttcctttgtaacccagagtccagagcgagccaaagccccctcgtat
accagcctccacacaaccacctcagtcagctggtgttacttgaactacgcgaagcccaac
ccgtctgcccagagggagtcacaaacctccgtttacacctcctggagcgtcagcatgcac
aaccccaacctgccaggcctgtccaccaagctggccctgtctctgctgagctctaagcag
aagcacagctcggagacctacaccatggccacagctctaacccctgcaacaggcaaggtg
gtctctgccagcagcagaaagacctacatttcagaggtacatgctatcccacccagcacc
cctgtcgaagtgaaggagccaccacagcagcctgagaaggggaagagagaagagcaaggg
ccctccacctccaaacagagcgaacctctccgcgtcaaaatcttagagggcgggtacaag
tctaatgaggagtatgtgtatgtgcggggtcgcggcagaggaaactatgtgtgcggagag
tgcgggatccgctgtaagaagcccagcatgctaaggaagcacattcgaacacacacggat
ctccggccctacatctgcaaacactgcaacttcgccttcaaaaccaaagggaaccttacc
aagcacatgaagtccaaggctcatgggaagaagtgccagtcaatgggaacgtctgggtct
tcactggacgagccagagaccgaggaagcaggtgtagcctggaggactggagtttggaga
attaggcatagtgtaagtttccccctcttctcatcaggaggtattgaagagcatttgtct
ggctccgaggaccaggatgagcaccagttctctgacgtggatgattcagaggaggacgat
gatgaggaagaggaagagtcctcatctcacgatgagctgccctcatcctgctcctccgac
cgcagtctgtccgcaagggggcactccagcagcggaagacggtcccagcagggcacgcct
gacccctcagccccagaactccagccagatcccagcccctgtcccagccaggagctctct
cccagccgtagaatgtggcccagcgggcatacttcctctccagaaagccggagggcactg
ttctcccgccggggctgggatgcctcccccagggccttctcccctagcagtgagagctgc
tctcccatccgaagcctttcccccagacgggagctggcctcccacaaccgacacctctcg
ccttcccccaagagaggaccatcccccatcagagctctatctcccctgtaccccatgcgg
cctctctcccctagccagtatcgggtgttgtgggcccgggcctctccctcgcccctgggg
gttcagcatagacctcgcagctcacccagtcgtttgccatgggacatccccagtatgatg
gccagcgatcgcagacaggtgggttcaatggagagaataggaacaccaagtgaagggcag
attggtccagagccctgcctgtcattccccccagctttccgtctgtcccccagtgacagc
cctaaagcccagtcccagtccatggaccgaatcttcagccacctgcctctgcactcacag
caggccagggtgccctacctgatgatctccattgggggcattcagatggtgcaggctcgt
ccccgctcccaccccactacccccaccttggcctcctctcccccgatggaggggcttcta
ctgggccagaccaggagggaagccccctggtgcaggacccccagaactcaagggctcaga
actcctggggaccactggtcagacagccaggaagtagtaggagccagccaatcagggctg
tgcattcccagtttaaccccacccatacattccaaaccctccacctcgcagcagggtagg
atggacccagggatgataaacacaaagcaatatcacagctcctcccactcacacaggtct
gaggcagagaccagagaacgatggccctcacatggccaggcaggaccgtccccccctccc
acacacaggattggacagctgtttgagaggcaggagccaccagggttggggtccagagcg
actgtttcagaattggtagagagaggatctaaaggcggagactcaaccaatcaagaccag
agcacttag
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integrated database retrieval system
