Salvelinus namaycush (lake trout): 120051127
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Entry
120051127 CDS
T07522
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120051127 (scrib)
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GFIT
Motif
Pfam:
PDZ
LRR_8
PDZ_6
LRR_4
PDZ_2
LRR_1
LRR_9
AbLIM_anchor
Motif
Other DBs
NCBI-GeneID:
120051127
NCBI-ProteinID:
XP_038853732
UniProt:
A0A8U0R3Z4
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Position
Sna7:complement(24604014..24712140)
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AA seq
1840 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQNVPDEIFRYSRSLEELLLDANQLRDLPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKALEIADFSGNPLSRL
PDGFTQLRGLAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNELEVLPDTLGALPKLRELWLDRNQLSSLPPELGNLRRLVCLDMSENRLEELPSELS
GLLALTDLLLTQNLLEVVPDSIGSLKQLSILKVDQNRLTHLSDSIGECENLTELVLTENL
LQTLPRSLGKLKKLTNLNADRNRLGSVPDELGGCASLNVLSLRDNRVAKLPAQLADATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDEENTGEKVLTCYLLPQQP
SSSLENLLQNSVDDSWTDSNLNRVSVIQFQEETTKQEAEDDEAAAERRGLQRRATPHHSE
LKVMKKGIEERRNEAYTSRADGETESPGAEEKRLSDLSNQSHDSAASNSTASANSHEERR
GLMTTDLVGGRGPQEEEELDEMEVEYVEPTVHFAEEPVYRGGDENGDDEEGEDGVPHSYE
EEQQRPQFPTEKQRLIRKDTPHYKKNFKITKLPKPEAVAALLQGFSPDAHLAQHPASHHT
APEEEEEEEEEEEEEEGEECMVTPQRHNRIEEPELEDRSLLHANSSLQPVKGVSFDQVNN
LLIEPARIEEEEHNLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEDGPAARAGV
KVGDKLLEVNGVALQGAEHHTAVEALRSSGTAVSMSVIREHMVEPENAITTTPLRPEDDY
FPRERRASGLPFCMEASSPAGPRHRRSACLVRNDKGLGFSIAGGKGSTAYRTGDLGIYIS
RIAEGGAAHRDSTLRVGDRVITINGVDMTEARHDQAVALLTGTSPTIALLVERDQAEPGT
AGGSPGLSRARAHSPPPPETSDSPDQEEGNDDSPHGTHLSRPLQDEYPIEEVMLVKAGGP
LGLSIVGGSDHASHPFGISEPGVFISKVILHGLACQSGLRVGDRILEVNTIDLRHATHQE
AVKALLSNKQEIRMLVRRDPSPPGMQEIVIQKQTGEKLGISIRGGAKGHAGNPFDATDEG
IFISKVSSSGAAARDGRLLVGMRILEVSNHSLLGMTHTEAVRVLRAVGDTLFMLVCDGFD
PGNAAAIEASPGIIANPFAAGIVRKNSMESISSIDRDLSPEEMDILQKEVEVARETSQWE
REEVERMRLEREEATRLLEEETENLGTGPLNLDYRTLAALPTTALQKVNRAPSTEPPRTD
SPIRDAPYSPSTQPASIHFPPTALPAKNNSPLSPYETRPGSIQPLSRGGGRPSTSPGTPD
GHSRDGHSSPNPFQHGPSPINSQTSDLYGQRNNVHSNLPSPSPEPELNNEVFEDKVEGDG
GLGGGLAAPVSPRPSLSSDRRDYMSLAAVPRLSRASMDMVVKTPSPGGRDSPEQRSFRDR
QKYFEIDMKQQTPDSKPKGRVSLVGADDLKKMREEEERRFEQRAREYLMDDDDEEEDDLV
KQMGVLKATGKVLLDGVEYKVEPVATPPRHYNTPPSYSATPPSYCGSSGASSVDGKGDSQ
RNSLEESFRLDQQRPNSMTGLIPVYPGESGAPIRTAKAERRQQERLRMQSPELAPAGDKD
LSPAEKRALEAEKRAMWRAARMKSLEQDALKAQMVIAKSREGKKRGTLDQLAESPSPAPT
PSPTPLEDFSPRGVTSPGRLSLSEKKFDYRQFAAIPSSKPVYDIQSPDMVDDFQFIDDGS
SNPVPAEVPTATSTLEEMALYRNKRKLRQGRRSLETAVPT
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccctttgtggcgctgtaaccgccacgtcgagtcggtggacaagcga
cattgcaatttgcaaaatgtccccgacgagatattccgctacagccgcagtctggaagag
cttctcctcgacgccaaccaactcagagatttacccaagcctttctttagacttctgaac
ctgcggaagctgggcctgagtgacaatgagatccagaggctccctcctgaggtggccaac
ttcatgcagctggtggagctcgacatctccagaaacgacattcctgagatccccgagagc
attaagttctgcaaggcgttggagattgcagacttcagtggaaaccccctctccaggttg
cctgatggtttcactcagctgcgagggctcgcccacctggccctcaacgacgtgtcactg
cagacactgcccaacgacataggaaacctggccaacctggtgacgctggagctcagggag
aacctgctcaagtccctgcccacgtcgctctctttcctggtgaaactggaacagctggac
ctgggcagcaatgaactggaagtattgccagacacacttggtgctctccctaagctacgg
gagctgtggttggaccgtaaccagctctcctcattgccaccagagctggggaacctgcgg
aggctggtgtgtctggacatgtcagagaaccgcctggaggagttgccctcggagctgagc
ggcctgctggccctcactgacctgctgctcacacaaaacctcctggaggtggtccctgac
agcataggctctctgaagcagctgtccatcttgaaagtggaccagaaccgactgacccac
ctgagcgactccataggagagtgtgagaacctgacggagctcgtgctgaccgagaacctc
ttacagactctgcctcgctcgctgggcaagctgaagaagctgaccaacctgaatgcggac
cgcaaccggctgggcagcgtgcccgatgagctgggcggctgcgccagcctcaacgtgctc
tccctcagggacaaccgtgtggccaagctgcctgctcaactggccgacgccaccgagctc
cacgtgctagacgtggcagggaacaggttacagaacctcccgtttgccctggccaacctc
aacctgaaggccatgtggctggcagagaaccagtcccagcccatgctcaagttccagacg
gaggatgaggagaacaccggggagaaggtgctcacctgctacctgctaccccagcagcct
tcctctagcctggagaacctgctccagaacagtgtagacgacagctggacagacagcaat
ctgaaccgcgtgtcagtcatccagttccaggaggagaccaccaagcaggaggcggaggac
gacgaggcggccgcggagcgcaggggtctccagcggcgggcgacaccacaccacagtgag
ctgaaagtgatgaagaaagggattgaggagaggaggaatgaggcctacacttccagagct
gatggagagacggagtcccctggtgctgaggagaagcggctgagcgatctgtccaatcag
agccacgactctgcggcgtccaacagcacggcctcggccaactcccacgaagagaggcgg
ggcctgatgaccacagacctggtgggtgggcgtgggccccaggaggaggaggagctagat
gagatggaggtggagtacgtagagcccacggtgcactttgcagaggagcctgtgtaccgg
ggtggggacgagaatggtgacgatgaggagggcgaggatggtgtcccacacagctacgaa
gaggaacaacagaggccccagttccccacggagaagcagcgtctgatcaggaaggacacg
ccgcactacaagaagaacttcaagatcaccaagctgccaaaacccgaggcggtggccgcg
ttactgcagggcttcagccccgacgctcacctggcccaacaccccgcctcgcaccacact
gcccctgaggaggaggaggaggaggaggaggaggaggaggaggaggaaggggaggagtgt
atggtaactccacagcgccacaacaggatagaagagccagagctggaggataggagtctg
cttcatgccaactcctccctgcagccggtcaagggggtgtcatttgatcaagtcaataat
ctgctgattgagcctgctcgaattgaggaggaagagcacaacctgaccattctacggcaa
actgggggtctgggcatcagcatagccggaggaaagggatccacaccctacaagggggat
gatgagggcatcttcatctccagggtgtctgaggacggacctgcggcccgggctggggtc
aaagtgggagacaaactcctcgaggtgaacggcgtggccctccagggggcggagcaccac
acggcggtggaagccctgcgcagctcgggcaccgccgtctccatgagcgtcatccgggag
cacatggtggagccggagaacgccatcaccaccacgccgctgaggcccgaggacgactac
ttcccccgggagagacgggccagcgggctgcccttctgcatggaggccagctcccccgca
ggcccccgacacaggcggtctgcctgcctggtccgcaacgacaagggcctgggcttcagc
atcgccgggggcaagggttccacagcttaccgcacgggggacttggggatctacatctcc
cgaatcgcagagggaggggcggcccaccgagacagcacgctccgcgtcggggacagggtc
atcaccatcaatggtgtagacatgacagaggccaggcatgaccaggcagtagcgctgctt
accggcacctcccccaccatcgccctcctggtggagcgcgaccaggccgagccgggcacc
gcagggggctccccgggcctgtcccgcgcccgcgcccactcccccccgcccccagagacc
tccgactcgcccgatcaggaggagggcaacgacgactcgccccacgggacccacctgagc
cggccgctgcaggacgagtaccccatcgaggaagtgatgttggtgaaggcgggcggccct
ctgggactgagcatcgtgggaggcagcgaccatgccagtcatccgttcggcatcagcgag
cctggtgtcttcatctcgaaggtgatcctgcatggcttggcgtgtcagagtgggctgcgg
gtcggggacaggatactggaggtgaacaccatcgacctgcgccacgccacccaccaggag
gctgttaaagccctgctctccaacaaacaggagatccgcatgctggtgcgcagagacccc
tcaccgccggggatgcaggagatagtgatccagaagcagactggagagaagctgggcatc
agcatacgtggcggtgccaaaggccacgctggcaaccctttcgacgccaccgatgagggc
atcttcatatccaaggtgagctccagtggtgcagcggccagagacggccgtctgctggtg
ggcatgcggatcctggaggtgagcaaccacagcctgctgggcatgacccacacggaggcc
gtgcgcgttctccgcgccgtgggagacacactgttcatgctggtgtgtgacggcttcgac
ccaggcaacgctgccgccatagaggcgtcgccgggcatcattgccaacccctttgcggcg
ggcatcgtgcgtaagaacagcatggagagcatctcctctatagaccgagacctgagtcct
gaggagatggacatcctacagaaggaggtggaggtagcgcgagagacgtcccagtgggag
agagaagaggtggagcgcatgcgcttggagcgtgaggaggctactcgcctgctagaagag
gagaccgagaacctgggcactggacctctgaatctggactaccggacgctggccgcactg
cccaccaccgctctgcagaaggtcaacagggcaccctccactgagccccccaggacagac
agtcccattagagatgccccctactcacctagcacacaaccggcaagcattcatttcccc
cccactgcactgcctgccaagaataactcgccattgagtccctatgagacgaggccgggt
tccatccagccactctcccgtggtggcgggcggccaagcacctcgccaggcactccggac
gggcacagcagagacgggcacagcagtcccaaccccttccagcatggcccctcccccatc
aactcccagacctctgacctgtatggccagaggaacaacgtccactccaacctgccttct
ccttctccagagcctgagctgaacaacgaggtgtttgaggataaggtagagggggacgga
ggactaggtggaggtctggcagcccccgtctctccccgaccctccctctcctctgaccgt
cgggactatatgagtctggcagcagtgccacgcctctccagagcctcaatggacatggtt
gtaaagactccatctcctgggggcagagacagcccagagcagcgctccttcagggacaga
cagaaatactttgagatcgacatgaagcagcagacgcctgacagcaagcccaaaggccgt
gtgtccctggtgggagcagatgacctaaagaagatgagggaggaggaagagaggagattc
gagcagcgggcgcgggagtacctgatggatgacgatgatgaggaggaggacgacctggtg
aagcagatgggagtgttgaaggccacgggcaaggtgttgctggacggggtggagtacaag
gtggagcctgtggccacgccccccaggcactataacacgccccccagctacagcgccacg
ccccctagctactgtggcagctcaggggcctcgtcagtggatggtaaaggagactcccag
aggaattccttagaggagagcttcaggttagatcagcagcggcccaactccatgactggt
ctgatcccagtgtaccctggagagtcgggggctcccatccggacggccaaggcagagcgg
aggcaacaggagcggctgaggatgcagagtccagagctggccccggccggagacaaggac
ctgtcccccgccgagaaacgggctctggaggccgagaagagagccatgtggagggcagca
aggatgaagtctctggagcaggatgctctgaaggctcagatggtcatcgctaagtctcgg
gagggaaagaagcgtggcacactagaccagctggccgagtcaccctcgcccgcccccacg
ccatcccccacccctctggaagatttcagtcccagaggagtgacgtcaccaggcagactg
tccctgtcggaaaagaagtttgactaccgacagtttgctgccattccttcttccaaaccc
gtatacgacatccagtcccctgacatggtcgacgactttcagttcattgacgacggctcc
agtaaccccgtgcccgctgaggtgcccactgccacctcaacgctggaggagatggccctc
tacagaaacaagcgcaagctgaggcagggccgccgcagcctggagaccgccgtgcccaca
taa
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