Salvelinus namaycush (lake trout): 120051143
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Entry
120051143 CDS
T07522
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120051143
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120051143
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_6
zf-RING_2
Fib_alpha
Prok-RING_4
zf-RING_5
Y1_Tnp
HeLo
ZapD
Gp58
MAP65_ASE1
LMBR1
Motif
Other DBs
NCBI-GeneID:
120051143
NCBI-ProteinID:
XP_038853776
UniProt:
A0A8U0R3Z0
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Position
Sna7:25888174..25894848
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AA seq
556 aa
AA seq
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MAQQAVLLDQDQFCCSVCLDLLKEPVAIPCGHSYCRSCIEGCWDQDDLKGIYSCPQCRQT
FTPRPALIKNTILAEVVEKLKKTGLQAAPLDLCYAGPGDVACDFCTGTRKQKALMSCLVC
LVSSCKTHLQPHYSVPGLKKHKLVKASTQLQENICSRHDELLKIYCRTDQNCICYLCMVD
DHKGHDTVSAAAERTEKQSQLGMSQQKLQERIQEREKEMKELHQAVESLKHTAQAAVEDS
DRIFTELIHSIERKCSELKELIRAQEKAQVSQADGLLEQLEQEIAELRRRNAELEQLSHT
EDHIHFLQSYQSLSSPSVSSDLPSIVIHPQNFGDVKKAVSDVREKLEDFLEGEWTKISTT
VNSVDILLPPEPKIRKHFLQYSCQLTLDPNTAQKSLSLSEGNRKVTVVNSVHDPNPDHPD
RFTDWWQVLCREGLSGRCYWEVEFHSGTVFTAVSYKDICRIGMVNDSRFGNNDKSWGLEC
SSKGYNFRHNNVETKVSGPQSSRVGVYLDHKAGILSFYSVSDTMSLLHTVETTFTKPLFP
GIWVWNQNNSAVLCTL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaggcagttctgctggaccaggatcagttctgttgttctgtctgtctggat
ctactgaaggagccagtagctattccctgtggacacagttactgtaggagctgtattgag
ggctgctgggatcaggatgatctgaaggggatctacagctgtcctcagtgcagacagacc
ttcactccaaggcctgctctgataaaaaacaccatattggctgaagtggtggagaaactg
aagaagacaggacttcaggctgctccccttgatctgtgctatgctggacctggagatgtg
gcatgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtgtgt
ctggtgtcttcctgcaagactcacctccagcctcactatagtgtccctggactaaagaag
cacaagctggtcaaagcctccacacagctacaggagaacatttgctcccgtcatgacgaa
ctgctgaagatttactgtcgtaccgatcagaattgtatctgttatctgtgtatggtggat
gatcataaaggccatgatacagtgtcagctgcagcggagaggaccgagaaacagagtcag
ctggggatgagtcagcagaagctccaggagagaatccaggagagagagaaggagatgaaa
gagctccatcaggctgtggagtctctcaagcacactgcacaggcagcagtggaggacagt
gataggatctttactgagctgatccactccattgagagaaagtgctctgagttgaaggag
ctgatcagagcacaggagaaagctcaagtgagtcaagctgatggactcctggagcaactg
gagcaggagatagctgagctgaggaggagaaacgctgagctggagcagctctctcacaca
gaggatcacatccatttcctccagagttatcagtctctctccagtcccagtgtctcttca
gacttacccagcatcgttatccatcctcagaactttggagatgtgaaaaaggctgtttct
gatgtaagagagaaactagaagacttccttgaaggagaatggaccaagatctccaccaca
gtaaattcagtggatatcttactgcctccagagccgaagattagaaaacacttcttacaa
tattcctgtcagctcacactggacccaaacacagcacagaaatccctctctctgtctgag
ggaaacagaaaggtgacagttgttaattctgttcacgatccaaatcctgaccatccagac
agattcactgattggtggcaggtcctttgtagagagggtctgtctggacgctgttactgg
gaggtggaatttcatagtgggactgtttttacagcagtctcatataaagacatatgtaga
atagggatggttaatgattctagatttggaaacaatgacaagtcttggggtttagagtgc
tctagtaagggttataatttcagacacaataatgttgagactaaagtgtcaggccctcag
tcctccagagtaggagtgtacctggatcacaaggcaggtattctgtccttctacagcgtg
tctgacacaatgagcctccttcacacagtcgaaaccacgttcactaaacccctctttcct
gggatatgggtttggaaccaaaataattctgctgtgttgtgtacactatag
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