Salvelinus namaycush (lake trout): 120051641
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Entry
120051641 CDS
T07522
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120051641
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120051641
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_6
zf-RING_2
Fib_alpha
ZapD
zf-RING_5
YscO-like
MAP65_ASE1
DASH_Dad3
NBP1
LMBR1
DUF445
Spc24
Motif
Other DBs
NCBI-GeneID:
120051641
NCBI-ProteinID:
XP_038854464
UniProt:
A0A8U0R6L0
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Position
Sna8:2746108..2751757
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AA seq
578 aa
AA seq
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MAQQGVLLDQDQFCCSVCLDLLKEPVTIPCGHSYCRSCIEDCWDQDVLKGVYSCPQCRQT
FTPRPTLTKSNILAEVVEKLKKTGLQAAPPPAHCYAGPGDVACDFCTGTRKQKALMSCLV
CLASYCETHLQPHYESPAFKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICYLCTM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQEREEELKELQQAVESLKRSAQAAVED
SDQIFTELIRSIERRSSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHITFLQSYQSLSSISVSSDLPSIVVHPLQYFGDVSKTVSELREKLEDFLKGEWTKIS
TTVNIVDVVLPPEPKTREQLLQCESLYCEVTNSLFLLILLTIPLEIYSNNSCQLTLDPNT
ANSHLSLSEGNRKVAYTSTVQPYPDHPDRFTNICQVLCREGLSGRCYWEVEWNGSLFHTA
VSYKDIGRTEEEDEFGRNDKSWSLECSRGDYFSHNNVRTKVSGPQSSRVGMYLDHKAGTL
SFYSVSDTMTLLHRVQTAFTQPLYPGFYLYATAELVQL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagggagttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggaaccagtcaccatcccctgtggacacagttactgtagaagctgtattgag
gactgctgggatcaggatgttctgaaaggggtctacagctgtcctcagtgcagacagacc
ttcactccaaggcctactctgacgaaaagtaacatattggctgaggtggtggagaaactg
aagaagacaggactccaggctgctccccctcctgctcactgttatgctggacctggagat
gtggcgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtg
tgtctggcctcttactgtgagactcacctccaacctcactatgaatctcctgctttcaag
aagcacaagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgttacctgtgtacaatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagaggaggagctg
aaggagctccaacaggctgtggagtctctcaagcgctctgcacaggcagcagtggaggac
agtgatcagatttttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatcactttcctccagagttatcagtctctctccagtatcagtgtatct
tcagacttacccagcatcgttgtccatcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaacagttg
ttacaatgtgagtctctttattgtgaagtaactaacagtctctttttactgatactccta
acaatccctctagaaatatatagcaataattcttgtcagctcacactggacccaaacaca
gcgaactctcacctctctctgtctgaagggaacagaaaggtggcctatacaagcacagtc
cagccatatcctgaccatccagacagattcacaaacatttgtcaggttctgtgtagagag
ggtctgtctggacgctgttactgggaggtggagtggaatggttcattgtttcatacagca
gtctcatataaagatatcggaagaacagaggaagaagatgaatttggaagaaatgacaag
tcctggagtttagagtgctctagaggggattatttcagtcacaataatgttaggactaaa
gtatcaggccctcagtcctccagagtaggaatgtacctggatcacaaggcaggtactctg
tccttctacagtgtctctgacacaatgaccctcctccacagagtccagactgcattcact
cagcccctctatcctgggttttatctctatgctactgctgagctggttcaactgtag
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