Salvelinus namaycush (lake trout): 120052283
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Entry
120052283 CDS
T07522
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120052283
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120052283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
Fib_alpha
U-box
Wtap
zf-RING_2
zf-RING_6
YscO-like
zf-RING_5
Spc24
Y1_Tnp
LMBR1
Motif
Other DBs
NCBI-GeneID:
120052283
NCBI-ProteinID:
XP_038855040
UniProt:
A0A8U0R4C5
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Position
Sna8:2838937..2847774
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AA seq
553 aa
AA seq
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MAQQGVLLDQDQFCCSVCLDLLKEPVTTACGHNYCRICIEGCWDQDVLKGVYSCPQCRQT
FTPRPTLRKNNMLAELVEKLKKTGLQAAPPPALCYAGPGDVACDFCTGTRKRKALMSCLA
CLASYCETHLQPHYESPAFKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICYLCTM
DEHKGHDTVSAAAERTEKQRQLVMSQQKIQQRFQEREKELKELQQAVESFKRSAQSAVED
SDQIFTELIRSIERRRSEVKELIRAQEKTQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSLSSISVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKIS
TTVNIVDVVLPPEPKTREQLLQYSCQLTLDPNTAHTHLSLSKGNKKVKCTSRVQPYPDHP
DRFTNYEQVLCREGLSGCCYWEVKWSGEDVDTAVSYKDISRTGTDGAFGYNNKSWSLQCY
RGGYWFRHNNVETKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQSLYPG
FWLCYSTAKLVKL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagggagttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcactactgcctgtggacacaattactgtagaatctgtattgag
ggctgctgggatcaggatgttctgaaaggggtctatagctgtcctcagtgcagacagacc
ttcactccaaggcccactctgaggaaaaataacatgttggctgagctggtggagaaactg
aagaagacaggactccaggctgctccccctcctgctctgtgctatgctggacctggagat
gtggcgtgtgatttttgcactgggaccagaaagcggaaagccctcatgtcctgtctggcg
tgtctggcctcttactgtgagactcacctccaacctcactatgaatctcctgctttcaag
aagcacaagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgttatctgtgtacaatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggtgatgagtcagcagaagatccagcagagattccaggagagagagaaggagctg
aaggagctccaacaggctgtggagtctttcaagcgctctgcacagtcagcagtggaggac
agtgatcagatctttactgagctgatccgctccattgagagaaggcgctctgaggtgaag
gagctgatcagagcccaagagaagactcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctctctccagtatcagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaacagttg
ttacaatattcctgtcagctcacactggacccaaacacagcacacacacacctctctctg
tctaaagggaacaaaaaggtgaaatgcacaagtcgagtccaaccatatcctgatcatcca
gacagattcaccaactacgagcaggttctgtgtagagagggtctgtctggatgctgttac
tgggaggtgaagtggagtggggaggatgttgatacagcagtctcatataaagacatcagc
agaacagggacagatggtgcatttggatacaataacaagtcctggagtttacagtgttat
cgtggtggttattggttcagacacaataatgttgagactaaagtatcaggccctcagtcc
tccagagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtctct
gacacaatgaccctcctccacagagtccagaccacattcactcagtccctctatcctggg
ttttggctctgttatagtactgctaagctggttaaactgtag
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