Salvelinus namaycush (lake trout): 120052285
Help
Entry
120052285 CDS
T07522
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120052285
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120052285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
U-box
zf-RING_5
zf-C3HC4_3
zf-RING_6
zf-RING_10
YscO-like
Y1_Tnp
DASH_Dad3
Fib_alpha
LMBR1
DUF677
Spc24
Motif
Other DBs
NCBI-GeneID:
120052285
NCBI-ProteinID:
XP_038855041
UniProt:
A0A8U0R2P0
LinkDB
All DBs
Position
Sna8:2538525..2551554
Genome browser
AA seq
553 aa
AA seq
DB search
MAQKGVLLDQDQFCCSVCLDVLKEPVTTACGHSYCRSCIEGCWDQDVLKGVFSCAQCRET
FTPRPTLRKNNMLAEMVEKLKKTGLQAAPPPALCYAGPGDVACDFCTGTRKQKALMSCLA
CLASYCESHLQPHYESPAFKKHKLVKATAQLQETICSHHDKLLEVYCRTDQQCICYQCTM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQEREKELKELQQAVESLKHSTQAAVED
SDQIFTELIRSIERRSSEVKELIRAQEKAQVSQAEGLMEQLKQEITELRKRSTELEQLSH
TEDHIHFLQSYQSLSSISVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKIS
TTVNIVDVVLPPEPKTREELLQYSCQLTLDPNTAGTRLSLSEGNRKVTYTRQVQPYPDHP
DRFTNHFQVLCREGLSGCCYWEVEWTGNVVITAVSYKDISRTETDGVFGYNNKSWSLQCF
SDGYCFRHNNVKTKVSSPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYPG
FYLCYSTAELVKL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaagggagttctgctggaccaggaccagttctgttgttctgtctgtctggat
gtactgaaggagccggtcactactgcctgtggacacagttactgtagaagctgtattgag
ggctgctgggatcaggatgttctgaaaggggtctttagctgtgctcagtgcagagagacc
ttcactccaaggcccactctgaggaaaaataacatgttggctgagatggtggagaagctg
aagaagacaggactccaggctgctcctcctcctgctctgtgctatgctggacctggagat
gtggcatgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggcg
tgtctggcctcttactgtgagagtcacctccaacctcattatgaatctcctgctttcaag
aagcacaagctggtcaaagctaccgcacaactacaggagacgatctgctctcatcatgac
aagctgctggaggtttactgtcgtacagatcagcagtgtatctgttatcagtgtacaatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagaga
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaaggagctg
aaggagctccaacaggctgtggagtctctcaagcactctacacaggcagcagtggaggac
agtgatcagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcatggagcaa
ctgaagcaggagataactgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctctctccagtatcagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaagagttg
ttacaatattcctgtcagctcacattggacccaaacacagcaggtacacgcctctctctg
tctgaagggaacagaaaggtgacctatacacgccaagtccaaccatatcctgaccatcca
gacagattcaccaaccacttccaggttctgtgtagagagggtctgtctggatgctgttac
tgggaggtggagtggactggtaatgtggttattacagcagtctcatataaagacatcagc
agaacagagacagatggtgtatttggatataataacaagtcctggagtttacagtgcttt
agtgatggttattgtttcagacacaataatgttaagactaaagtatcaagccctcagtcc
tccagagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtctct
gacacaatgaccctcctccacagagtccagaccacattcactcagccgctctatcctggg
ttttatctctgttatagtactgctgagctggttaaactgtag
DBGET
integrated database retrieval system
