Salvelinus namaycush (lake trout): 120053345
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Entry
120053345 CDS
T07522
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13-like
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120053345
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120053345
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120053345
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120053345
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120053345
Ubiquitin system [BR:
snh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120053345
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120053345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA
zf-UBP_var
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
120053345
NCBI-ProteinID:
XP_038856395
UniProt:
A0A8U1EMK6
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Position
Sna9:complement(6707054..6744752)
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AA seq
866 aa
AA seq
DB search
MAADLGELLVPYMPTIRVPRTGDRVFKSECAFSYDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMLLKRHVKEKATGSAGGAISRRRNGRVFLDLELNRDFNGDEYECEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAASAYKKQESDSWDEEIQVSKHARSLRQQD
NGVRIPPSGWKCQKCEMRENLWLNLTDGAVLCGKWFFDGAGGNGHALDHYKDTNFPLAVK
LDNITADGADIYSFDEEEAVLDPHISEHLQHFGIDMLQMQQVKNGHLNTDNTESVRPRVS
EWEVIQESGMKLKAVYGSGFTGIKNLGNSCYLGTTMQVLFSIPEFQRAYVGNLQRIYDYS
PLDPTTDFSTQMAKLGHGLLSGLYSKPPMKSELIEQVMREEYKHQSKGISPKMFKAMVSK
GHPEFSSNRQQDAHEFFLHLINLVERNSAGSENPSDVFRYLVEERVQCCQTQKVCYNQKV
DYLMQLPAPMEAASNREELIAYEAKRREAEENMRAPPEPVRARIPFTACLQAFTEPENVP
DFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGVDWVPKKLDLSIDVPDFLDLSRLR
GTGLQAGEEELPDLTPPIVLPEDTRDDSMNSSDSPDIDESAAMQLAEMGFPLEACRKAVY
YTGNMGPEMAFNWIIAHMEEPDFAEPLALPSFMEPGPSMASLGLAATPLDNQPPEESIAI
LTSMGFPRRHTVQALKTTNNNLERALDWIFTHPEREEEEEASDDLLDMSDIMEPNDNTFS
NANTNSHSTLSPDQDASGPRIKDGPGRYELFAFISHMGASTMSGRYVCHIKKEGRWVIFN
DHKVCLSERPPKDLGYIYFYRRLSSC
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagatttaggagagctgcttgtcccttatatgcccaccatcagagttcccaga
acaggagacagggttttcaagagcgaatgtgccttttcctacgattctcccgagtctgag
ggaggattgtatgtgtgtatgaacacattcctgggctttggcagagaacatgtggagaga
cattaccgtaaaaccggacagagtgtttacatgctcctcaaacggcatgtcaaagagaaa
gccacaggttccgcaggaggcgccatctccagaagaagaaatggcagagtgttcctggat
ttagaactaaaccgtgattttaacggggatgagtatgagtgtgaagacgaggccaagctc
gtcatattcccagaccacttcgagatccccttaccaaatattgaggagttgcctgcactg
gtgacaatagcctgtgatgccgtgctcaacgctgcgtcagcctacaaaaagcaggagtct
gactcctgggacgaggagatccaggtgtccaaacatgccaggagtctccgacagcaggac
aacggagtgagaatcccacccagtggttggaaatgtcagaagtgtgagatgagagagaac
ctgtggctgaacctgacggacggagcggtgctttgtgggaagtggttcttcgacggtgct
ggaggaaacggccatgccctggaccactacaaagacaccaacttccccctggcagtcaaa
ctggacaacatcaccgcagatggagcagatatatattcatttgatgaagaagaagcagtc
ctggaccctcacatatccgaacacttgcaacactttggaatagacatgctacagatgcag
caggtaaaaaatggccacctcaacacagacaacacagagagcgttcggcctcgggtcagc
gagtgggaggtgatccaggagtcaggcatgaagctgaaggcggtgtatggctcaggtttc
acaggcattaagaacttgggtaacagctgctacctgggcaccaccatgcaggtccttttc
agcatcccagagttccagagggcgtatgttggaaatctacagaggatctatgactactca
cctcttgaccccaccacggatttcagcacacaaatggctaaactgggccacggacttctc
tcaggcctgtactccaaaccaccaatgaaatccgagctcattgaacaggtgatgagagaa
gaatacaagcaccagtcgaagggcatctctcccaagatgttcaaagccatggtcagcaag
ggccaccccgagttctcctccaacagacagcaagacgcacacgagttcttcctgcacctc
atcaacctggtcgagagaaacagtgctggctcagagaaccccagcgatgtcttccgctac
ctggtggaggagcgtgtgcagtgctgccagacgcagaaggtgtgctacaaccagaaggtg
gactacctgatgcagctcccggcccccatggaggctgcctccaacagagaggagctgata
gcgtatgaggccaagcgaagagaggcagaggagaacatgagagcccctccagagcctgtg
agggcccggatccccttcacagcgtgcctgcaggccttcacagagccagagaacgtcccc
gacttctggagctcagcactgcaggccaagtcagctggagtcaagacttctcgtttcgcc
tccttcccagagtatctggtagtgcagattaagaaattcacatttggggttgactgggtt
ccaaagaaattagatctgtccatagacgtaccagacttcctggatctgtctcgactccgg
ggcacagggctgcaggcaggagaggaagagctccctgacctcaccccccccatcgtcctg
cctgaagacaccagagatgactcaatgaactcctcagattccccagatatagatgagtcg
gcggctatgcagctggcggagatgggcttccctctggaggcctgtcggaaggccgtttac
tacacagggaacatgggccctgaaatggccttcaactggatcatagcccacatggaggag
cctgactttgctgagcccctggccctgccttccttcatggagccaggcccctccatggcc
agcctgggcctggctgccacccccctggacaaccagcctccggaggagagcatcgccatc
ctcacgtccatgggcttcccccgccgccacaccgtccaagccctcaaaaccacgaacaac
aacttggagagggctctggactggatcttcacccatccggagagggaggaggaggaggag
gctagcgacgaccttttggacatgtctgacatcatggagcccaacgacaacaccttctcc
aacgcaaacacgaacagccactccacgctgtccccagaccaggatgcctcgggcccccgg
atcaaagacggacccggacgttacgagctttttgctttcatcagccacatgggagcgtcc
acgatgtctggtcgttatgtatgtcatatcaaaaaggaaggaagatgggtgatcttcaat
gaccataaagtgtgtttgtcagaaaggcctccaaaagacttgggctacatctacttttac
cgtcggctgtctagctgctag
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