Salvelinus namaycush (lake trout): 120054358
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Entry
120054358 CDS
T07522
Symbol
ptprc
Name
(RefSeq) receptor-type tyrosine-protein phosphatase C
KO
K06478
receptor-type tyrosine-protein phosphatase C [EC:
3.1.3.48
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecules
snh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120054358 (ptprc)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120054358 (ptprc)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120054358 (ptprc)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
snh04090
]
120054358 (ptprc)
Enzymes [BR:
snh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
120054358 (ptprc)
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
120054358 (ptprc)
CD molecules [BR:
snh04090
]
Proteins
120054358 (ptprc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
DSPc
fn3
Y_phosphatase3
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
120054358
NCBI-ProteinID:
XP_038857696
UniProt:
A0A8U1BNU5
LinkDB
All DBs
Position
Sna10:complement(43844726..43870075)
Genome browser
AA seq
1425 aa
AA seq
DB search
MAGLYGLKILLLCTGLIELAICVGDTTLTGSTAAKFPPTTVAITSTPPSIPITPLNSQTA
STSATSPTIADQDKSNISIPLTTQSTKKANDSTGPLLPNTTTITTTTPTTRSPTLSSLTP
TSNIITQASSQATLSNAPGDSSTGTSDPASTLNQTQAFPTNISTSQPQTLPTNTSTSQPQ
TLPTNTSTSQPQTFPTNNSISPSPSLPTSTPPIHNQTSPASTPTSTTAIPTGSQTKPTPP
KCTYTVKPVKYGFRIDLKASTSNTYNISYQDETRQTRQTNGWRQLGNSTVEVKSLKPCNI
YTVMKIQPECELEGNRTLTTWKLEKDDIVEDIDCIPGSICYLSDWDISEATPNGLEKSQM
RSHTCGDKSNALCFELRPADFCSEVNTTFPPETCANFTKTKLIPVESFLNANKIVLVQPE
RLPAKIKWENEPVNCNETLAINYTCQEQSNKNNLNLSQLEPFTNYTCTGRINHGNRTIVN
TTSFRIECDVVINVTKRESTNSSISLEWEPSIDKCQRSDLLHLTYNCCCQHNKHVCNITK
TQKCVVEGLDAYTKYTCSIQPVKYKNNTINISKKKLSKTIETATGVPDMVDIQTLTLTQN
NAFTIKCTQSEPKKWRGTGKVYIATITGSGLHKTRNNTMCSFTFEDLSYLTTYTVQIFTD
NGKHRSKPTETQTTTQYNDKAVIGFLVFLIVLTSLALLFVLYKIYILQRKKSNDNDEQIE
LIQPSDEENLLNVEPIGSEVLLDAYKRKIADEGRLFLQEFQSIPRIFSRNSVREAKKSCN
QPKNRYVDILPYDYNRVQLTTGNGETGCDYINASFIDGFKESKKYIAAQGPKEETVGDFW
RMVWEQQSSIIVMVTRCEESNRNKCAQYWPSPEREVEIFEEFVVKLNREEHCPDYIIRHL
SLTNKREKSAEREVTHIQFTSWPDHGVPGEPHLLLKLRRRVNAFKNLFSGPIVIHCSAGV
GRTGTYMGIDAMMEGLEAEGRVDIYGYVVKLRRQRCLMVQVEAQYILIHQALIEHNQFGE
TEISLAELHPTLGTLKQRDPGNEPTLLEAEFQRLPRYKNWRTFNTGINEENKKKNRSSSV
IPYDYNRVLVKLEDESSNDQDDDDDDDASSDEEDEESTKYINATQIDGYWCQRSLIAAQG
PLADTTGDFWQMVFQKKVETIVMLSDLTEGDQEFCSAYWGDEKKTFREIEVELKATETLP
AYTTRSIQIRHPKRKDSRQVKQYQFLKWAGRELPEKPQDLTDMIKNIKQTCGYGNSKAER
ILPVVVHCNDGSSRSGIFCALWNIMDSAETEKLVDVFQVAKALRKERQGMIHSLEQYQFL
YDAVEGSFPIQNGEVKQPATAPAAAADSIQVVNETKAEQPASATTATQQGAEVVKEAIES
TPLVAGKEAGAAAEGNEDEAKEPGSPTEKTPLEGASNGPAVTLEV
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtctctatggactgaagatcctgctgctgtgtactgggctcatagagctggcc
atatgtgttggtgatacaactttgacaggctccacagcagcaaaattcccaccaacaaca
gtagccatcaccagcacacccccaagcattcccatcacacctttaaactcacagacagca
tccacctcagccacttctccaaccatagctgaccaagacaaaagcaacatctccattcct
ctaaccacacaatccaccaagaaagcaaacgactccacaggccccttacttccaaacacc
accaccatcaccacgacgacccctaccacccgctcacctacactcagttcgcttaccccc
acctcaaacatcatcactcaggcatcaagccaagctaccctctccaacgcacctggcgac
tcgagcacaggcacttctgaccctgcaagcaccctcaaccaaacccaggcctttcctaca
aacatctccacctctcaaccccagactttgcctacaaacacctccacctctcaaccccag
actttgcctacaaacacctccacctctcaaccccagacttttcctacaaacaactccatc
tctccatctccatctttgcctacaagcactccacccatccacaaccaaacctcacctgca
agcaccccgacttccactacagctatccccacaggcagccagactaaaccaacaccgcca
aagtgtacatacacggtcaagcctgtcaaatatggctttcggattgatttaaaggcctca
acctccaacacatacaacatatcgtaccaggatgaaacacgacaaacacgacaaaccaat
ggttggcgtcaactggggaactccactgttgaggtgaagtcattgaagccttgcaatatc
tatacagtgatgaagattcagcctgaatgtgaactcgaaggaaacagaactctgaccact
tggaaattggaaaaagacgacattgtggaagacattgactgcataccggggtctatttgc
tatttgagtgactgggatatcagtgaagcaactccgaacggccttgagaaatcccaaatg
agatcccacacatgcggagacaaatccaatgcgctatgttttgagctaagaccggccgac
ttctgctcagaagtcaatacaacctttcctccagagacgtgtgccaactttaccaaaaca
aaactcatccctgtcgaaagtttcctaaatgccaacaaaattgtcctggtacagcctgaa
cgtcttcctgcaaaaataaagtgggaaaatgagccagtgaattgtaatgagactctagcc
attaattacacctgccaggaacaaagcaacaaaaacaatttgaatttgtctcagttggaa
cccttcacaaactacacttgtaccggacgtattaaccacggcaatagaacaattgtaaat
accacttcatttaggattgagtgtgatgtggtcataaatgttacgaagagggaatccaca
aatagctccatcagtctggaatgggaaccgtccattgataagtgccaacgctctgacctt
ctgcacctcacatacaactgctgctgtcaacataataaacatgtttgcaacataactaaa
acacagaaatgtgtcgtcgagggcctggatgcgtacacaaagtatacctgctctatacag
ccagtaaagtacaagaataataccatcaacatatctaaaaaaaaactctcaaaaacaatc
gagactgctactggagtgcctgatatggtggacatccagactttgactttgactcagaat
aatgcttttaccattaaatgtacgcaatcagagccaaagaagtggaggggaacgggaaag
gtgtacattgcaacgatcactgggtctggtcttcataagacacgaaacaatacaatgtgc
agttttacatttgaggacctcagctatttaacaacctacacagttcagatctttacagac
aatgggaaacacaggagcaaaccaacagaaacacaaacgactactcagtacaatgacaaa
gctgtgattggattccttgtgttcctcatcgtcctgacgtctctggctctcctcttcgtt
ctctacaagatctacatcctgcagcgcaagaagtccaacgacaatgatgaacagattgag
ctgattcagccaagtgatgaggagaacctgctgaacgtggagccaatcggatctgaggtg
cttctggacgcctacaagaggaaaatcgcagacgagggacgtcttttccttcaggagttt
cagagcatccccaggatcttcagccgcaactcggtcagagaggccaagaagtcctgcaac
cagcccaagaaccgctacgtggacatcctcccatacgactacaaccgtgtccagctgacc
actggtaatggagagactggctgtgactacatcaacgccagcttcattgacggtttcaag
gagtctaagaagtacatcgcagctcaaggtcccaaggaagagacagtgggggatttctgg
aggatggtttgggagcaacagtcctctatcatcgtcatggtaacacgttgtgaagagagt
aacaggaacaagtgcgcccagtactggccgtctcctgaaagagaggtggagatctttgag
gagtttgttgtgaagctgaacagagaagagcactgtcccgattacatcatccgtcacctc
agcttgaccaacaagagggagaagagtgcagagagggaggtgacccacatccagttcacc
agctggccagaccacggtgtgccaggagagccacacctcctgctgaagctgaggcgacgc
gtcaacgccttcaagaacctcttcagtggacccatagtcatccactgcagtgctggagtg
gggagaacaggcacttacatgggcatcgatgccatgatggaggggctggaggctgagggc
agagtggacatctacggatacgtggtcaagctccggcgccagagatgcctcatggttcag
gtggaggctcagtacatcctgatccatcaggctctgatagaacacaaccagtttggagag
acagagatctccctggcagagctgcacccaacactgggcacgctcaaacagagagacccc
ggtaacgagcctactctgttggaggcagagttccagagacttccacggtacaagaactgg
cggacattcaacacggggatcaacgaggagaacaagaagaaaaatcgctcctcttctgtt
attccatacgactataacagggttctggtgaagctagaggatgagagcagcaatgaccag
gacgatgatgacgatgatgatgcctcttctgacgaagaggatgaggagtccaccaaatac
atcaacgccacacagatagatggttactggtgtcagaggagtctgatagcagcccagggc
cctctggccgacaccacaggagacttctggcagatggtcttccagaagaaggtcgaaacc
atcgtcatgctgtcagacctcacagagggagaccaggagttctgctcagcgtactgggga
gatgagaagaaaaccttcagggaaatcgaggtggagttgaaggccacagaaaccctccca
gcgtacaccactcgcagtatccaaatccgtcaccctaagaggaaagacagtcggcaggtg
aaacagtaccagttcctgaagtgggcgggacgagaactcccagagaagcctcaggatttg
acagacatgatcaagaacatcaagcagacctgtggctatggcaacagcaaggcagagagg
atcctgcctgttgtggtccactgcaatgatggctcgtctcgctctgggatcttctgtgcg
ttgtggaacatcatggacagtgctgagacagagaaactggtagacgtgttccaggtggcc
aaggctctgcgcaaggagaggcaaggcatgatccacagcctggagcagtaccagtttctg
tatgatgccgtggagggatcgtttcctattcagaacggggaagtgaagcagccagccacc
gccccagctgcagcagctgactccatccaggtcgtcaacgagaccaaggcagagcagcct
gccagcgctaccacagccacccagcagggggcagaggtggtgaaggaggcgatagagagc
actcccttagtggcagggaaagaagcaggtgctgcagcagagggcaatgaggatgaggct
aaagagccaggtagccctacagagaaaacccctctggagggggctagtaacggccccgct
gtcaccctggaggtgtga
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