Salvelinus namaycush (lake trout): 120055128
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Entry
120055128 CDS
T07522
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13-like
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120055128
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120055128
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120055128
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120055128
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120055128
Ubiquitin system [BR:
snh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120055128
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120055128
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
120055128
NCBI-ProteinID:
XP_038858984
UniProt:
A0A8U1EI12
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Position
Sna10:complement(6017153..6070859)
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AA seq
866 aa
AA seq
DB search
MAADLGELLVPYMPTIRVPRTGDRVFKNECAFSYDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAIPRRRNGKVFLDLELNRDFNGDEFECEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAASAYKKQEPESWDEEIQVSKHARSLRQQD
NGVRIPPSGWKCQKCEMKENLWLNLSDGVVLCGKWFFDGAGGNGHALDHFKDTNFPLAVK
LDNLTPDIADIYSFDEEEAVLDPQISEHLQHFGIDIIQIQRVHNGHHNTDNTNNVRPRVS
EWEVIQESGMKLKAVYGAGFTGIKNLGNSCYLGTIMQVLFSIPEFQRAYVGNLQRIYDYS
PLDPSTDFSTQMAKLGHGLLSGLYSKPPMKSELIEQVMKEEYKHQPKGISLKMFKALVSN
GHPEFSSNRQQDAQKFFLHLINLVERNSVGSENPNDAFRYLVEERVQCCQTQKVRYTQKV
DYLMQLPAPIEAASNREELIAYEAKRNEAEENMRAPPEPVRARIPFTACLQAFTEPENVP
DFWSSELQAKSAGVKTSRFASFPEYLVVQIKKFTFVVDWVPKKVDLSIDIPDFLDLSRLR
GTGLQAGEQELPDLTPPIVLPEDTRNNSMNSSDSPEIDESAAVQLAEMGFPLEACRKAIY
YTGNMGPEMAFNWIIAHMEEPDFAEPLALPTFMDPGPSVASSGLAATPLDNQPPEESIGI
LTSMGFPRRHTVQALKATNNNLERALDWIFTHTEREEEEETSDALSDMADTTEPNDSAFS
NANTHSDSTLSPDQDASGPRIKDGPGRYELFAFISHIGASTMSGHYVCHIKKEGRWVIFN
DHKVCLSERPPKDLGYIYFYRRLSSS
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagatctaggagagctgctggtcccttatatgcccaccatcagagttcccaga
acaggagacagggttttcaagaatgaatgtgccttttcctacgattcgcccgagtctgag
ggaggcttgtatgtgtgtatgaatacattcctgggttttggcagagaacatgtggagaga
cattaccgtaaaacgggacagagtgtttacatgcatctcaaacgccatgtcaaagagaaa
gctacaggtgccgcagggggtgccatccccagaagaagaaacggaaaagtgttcctagat
ttagaactaaaccgtgattttaacggagatgagtttgagtgtgaagacgaggccaagctc
gtcatatttccagaccacttcgagatccccttaccaaatattgaggagttgcctgcactg
gtgacaatagcctgcgatgccgtgctcaacgctgcgtcagcctacaaaaaacaggagccc
gagtcctgggacgaggagatccaggtttccaaacatgccaggagtctccgacagcaggac
aacggcgtgaggatcccacccagtggatggaaatgtcagaagtgtgagatgaaagagaac
ctgtggctgaacctgtcggacggagtggtgctttgtgggaagtggttctttgatggtgcc
ggaggaaatggccacgccctggaccacttcaaagacactaacttccccctagccgtcaag
ctggacaacctcaccccagacatagcagatatttattcgttcgatgaagaagaagctgtc
ctggacccgcaaatatccgaacacttgcaacactttggaatagacattatacagattcag
cgggtacataacggccaccacaacacagacaacacaaacaacgtgcggccgcgagtcagc
gagtgggaggtgatccaggagtcgggcatgaagctgaaggcagtgtatggcgcgggtttc
acgggcatcaagaacctgggtaacagctgctacctgggcaccatcatgcaggtcctcttc
agcatccctgagttccagagggcgtatgttggaaatctacagaggatatatgactactca
cctcttgaccccagcacggacttcagcacacaaatggctaaactgggccacggactcctc
tcaggcctgtactccaaaccaccaatgaaatccgagctcattgaacaggtgatgaaagaa
gaatacaagcaccagccaaagggtatctctctcaagatgttcaaagccctggttagcaat
ggccacccagagttctcctccaacagacagcaagatgcacagaagtttttcctgcatctc
atcaacctggtggagagaaacagtgtgggctcggagaaccccaacgacgccttccgctac
ctggtggaggagcgcgtgcagtgttgccagacgcagaaggtgcgctacacccagaaggtg
gactacctcatgcagctcccggcccccatcgaggccgcctccaacagagaggagctgata
gcgtatgaggccaagcgaaacgaagcagaggagaacatgagggcccctccagagcccgtg
agggcccggatccccttcacagcgtgcctgcaggccttcacggagccagaaaacgtcccc
gacttctggagctcggagctgcaggccaaatcagctggagtcaagacttcccgtttcgcc
tccttcccagagtatctggtggtgcaaataaagaaattcacatttgtggtggactgggtt
ccaaagaaagtagatttgtccatagacatcccagacttcctggacctgtctcggctccgg
ggaacaggactgcaggcgggagaacaagagctcccagacctcacaccccccatcgtcctc
cctgaagacaccagaaacaactcgatgaactcctcagattccccagaaatagacgagtcg
gcggcagtacagctggcggagatgggcttccctctggaggcctgtcggaaggccatctac
tacactgggaacatgggccccgagatggccttcaactggatcatagcccacatggaggag
cctgactttgctgagcccctggcactgccaaccttcatggatcccggcccttccgtggcc
agctcgggcctggctgccacccccctggacaaccagcctccagaggagagcatcggcatc
ctcacctccatgggcttcccccgccgccacaccgtccaggccctaaaagccacgaacaac
aacctggagcgggcgctggactggatcttcacccacacggagagggaggaggaggaggag
actagcgacgccctgtctgacatggccgacaccacggagcccaacgacagcgccttctcc
aatgccaacacgcacagcgactccacactgtccccagaccaggacgcctcaggcccccgg
atcaaagacggacccgggcgttacgagctttttgctttcatcagccacatcggagcgtcc
acgatgtctggtcattatgtatgccacatcaaaaaggaaggaagatgggtgatcttcaat
gaccacaaagtgtgtttgtcagaaaggcctccaaaagacttgggctacatctacttttac
cgtcgactgtctagcagctag
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