Salvelinus namaycush (lake trout): 120056653
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Entry
120056653 CDS
T07522
Name
(RefSeq) homeobox protein CDX-1-like
KO
K09312
homeobox protein CDX1/4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120056653
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
120056653
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Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
120056653
NCBI-ProteinID:
XP_038860793
UniProt:
A0A8U1BRX2
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Position
Sna12:complement(46621461..46626629)
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AA seq
252 aa
AA seq
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MYVSYLLEKEPSMYPNPVRHPSLNLNHQNFVPAPPQYSDFSGYHHVAGINNDPHHSQTGA
WNPAYPPSREEWSPYGPGTGPSTSNPGPIGYSPPEFSPVPQSGLLPSINSSVGQLSPNSQ
RRNPYDWMRRSVPPANSGGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELATS
LSLSERQVKIWFQNRRAKERKVNKKKMQQPQPASTTTPTPPGSGMPGNVAMVTSSSGGLV
SPSIPMTIKEEY
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagttatcttttggagaaggaacccagcatgtacccaaatccagtgcgacat
cccagcctcaacttgaaccatcagaactttgtccctgcacctccgcagtattcggatttc
agcggataccaccacgttgctgggattaacaatgaccctcaccacagccagacgggggcc
tggaaccccgcttacccgccgagccgggaagagtggtcaccctatgggccggggacagga
ccgtccacatctaatccggggccaatagggtatagtcccccagagttctctccagtccca
caatccggtcttctcccgtctatcaactcatctgttgggcagctgtctcccaattctcag
cgcagaaacccttatgattggatgaggcggagcgtaccaccggcaaattcaggtggtaag
acaagaacgaaagacaagtaccgggtggtgtacacagatcaccagcggttggagctggag
aaagagttccactatagccgctacatcaccatcaggaggaaagcagagctggccacgtct
ctcagcctctcagaacgacaggtaaaaatctggtttcagaatcggcgtgccaaagagagg
aaagtgaacaagaagaagatgcagcagcctcagcctgcgtccacaacaacacctactccc
ccaggctctggcatgcctggcaacgttgccatggtgaccagcagcagtggcggcttagtg
tctccgtctataccaatgactatcaaagaagaatactga
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