Salvelinus namaycush (lake trout): 120057272
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Entry
120057272 CDS
T07522
Name
(RefSeq) nuclear factor related to kappa-B-binding protein-like isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120057272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120057272
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
120057272
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
120057272
NCBI-ProteinID:
XP_038861753
UniProt:
A0A8U1BTE3
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Position
Sna12:43346190..43360299
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AA seq
1251 aa
AA seq
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MDVLDHMLTDPLDSEKANDGRITEECMLGDCRVSIPEDLLEDPEIFFAVLSESTWSKVLT
DEQRQHLRQLLPHFPDDNTSEQDRTISDLFNNQNFCFGNPLHLAQKLFKDGHFNPEVVMY
RELCAKSQKKRQLYSLQQYYHKLLKQILVSRKELLELAVRSGPDIAVKRKCPARTPGEMQ
EQRVRGRVCWILREVKTECGDRYPSSDDDASSLPTPQSPSSSTPTVSVRVLPSLSTQDMK
TTDKPELGANDMRAMLRRHREKRRRQPDHPDLMTSDIHLGDMMSRVDMGRKGAMLALFDP
ARPKRKMREERRKKMRRIKVESEDPCQALMPSEAPSLDTPVTPLPSVKEEPLGEVQDNPV
MVEEIAVTFFNLLENILRLEGLASTAMLEEKVRQWQTSPASSLNPRFSSASCWSDMVLPA
LHFLAGESKVGMMALPSGFTPYVVFRENSQQWEWIGLEGPSQNGQKDLSALWQLWVDSKD
LVVVKAECEELTEMTSPTPRASWTDYVVRASTGDERHVFQVQEQQRYDQPHKAFTFRMHG
FESQVGPVKGVFDKMSLNKAREHTLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEICEL
LKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIVRKLWNYLHRDRGQEEFEKIH
QAQATAAKARKTLQQKPKPASKPSGSKEDGGKTSGGLEAGDMGGPMSPTPSTPGTPKSPL
APVATTPTKAGIPDSVKTGPGFLLVSPPPIPQLGTLLSSNQSGPQISQPASSQHSARVVG
HQSGSPPQVRVVSAQTARGQQAMLVHQTPRQIRVPVTVGAKVITQTVVSLPLRTLSFGSP
TQGQAARGQTTLSMSGLTTAQTGFPGSPAHHPASPAVLQGVTSQNIIQQVAITGQMGVTA
QGGAAIPIPATNLRIQGKDVLRLPLSSITTDSKGQTVLRITPEMMATLTKSPVTTFKLTP
DMLGTATTKSISATLHLTPPHHSSPCSPASSSGDVLTSKTYAGTTTLLKAAGDAMRLMPT
LAVTMAEQKARTFSTVSSSDSKSGTTIRIMPGLGVIPQKRGQAITVTTTTGSKPVSTGAA
TVPIATSGVAVAKGVTIGPSASGSLTQGTATATVRQVPVTATVVSTRPGKLPARIPGPLS
VLSQPLKSKCGMTTPILKGNISTNISSLGRNIILTAMPAGTKLIAGNKPVSFVTAQELQQ
LQQQGQATQVRFRTVPAQQLSAAGSPKSVSAAVVTTAPSPKRTPDPPPPAQ
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggatgtccttgatcacatgctgacagaccccctggactcagagaaggccaatgatggg
cgcatcactgaagagtgcatgttgggagactgtcgagtgagcattccagaagacctgctt
gaggatcctgaaatcttcttcgctgtgctgagtgaaagcacatggtctaaagtactgacc
gatgaacagaggcagcatctccgtcaattgttaccgcactttcccgacgacaacacctct
gagcaggaccgcaccatcagtgacctcttcaacaaccagaacttctgcttcggaaacccc
ttgcaccttgcacagaaactgttcaaagatggccattttaatccagaagtggtcatgtac
agagagctgtgtgccaagtcccagaaaaaacgtcagctctactctttgcagcagtactac
cacaaactcctcaaacagatcctggtctctagaaaggaactactggagttggcggtccgc
agtggccctgacatcgcggtaaagagaaagtgccccgcccggacgcctggtgagatgcag
gaacagagggtcagaggaagagtctgctggatactaagggaagttaaaacggagtgtgga
gaccgatacccgtcatctgacgatgatgcctcttcgctgccaacacctcagtctccttcc
tcttccacacctacggtctctgtcagggttctgcccagtctctccacccaggacatgaaa
accaccgataagccagagctgggagcgaatgacatgagagccatgctacggagacataga
gaaaagaggagacgacaaccggatcatccagatttgatgacctctgacatccacttgggc
gacatgatgtctagagtggacatgggtcgtaaaggcgccatgttggcactgtttgacccg
gctcggcccaagaggaagatgagggaggagaggagaaagaagatgaggagaattaaagtg
gagtccgaggatccctgtcaggctctgatgccttcagaagctccatcacttgacacccca
gtcactccactgcccagtgtcaaggaagagccgttgggggaggtgcaggacaaccctgtc
atggtggaggagattgctgtgaccttcttcaacctgctggagaatatcctgagactagag
gggctcgccagcacagccatgttggaggagaaggtccgacagtggcagacatctccagct
agttccctgaacccccggttctcctcggcctcctgctggtcagatatggtgctgccggcc
ctgcacttcctggctggggagagtaaagttggtatgatggctcttcccagtggcttcacc
ccttatgttgtgttcagggaaaactcacagcaatgggaatggattggtcttgaaggtccc
agtcagaatggacagaaggatttgagtgctctgtggcagctgtgggtcgactccaaggac
ctggttgtggtcaaggcagaatgtgaagaactaacagagatgacttctcccacccctaga
gccagttggacagactacgtggtgcgggccagcactggagacgagaggcatgtttttcaa
gtgcaggagcaacagcggtatgaccagccacacaaagctttcaccttcagaatgcatggc
tttgagtctcaggtggggcctgttaaaggggtctttgacaagatgtctctcaacaaagcc
agagaacacactctgctgcgctcggaccgcccagcctatgtcaccatcctctccctggtg
cgggacgcagcagcccggctgcccaacggagaggggaccagggctgagatctgtgagctg
ctcaaggactctcagttcctggcaccagatgtcaccagtgctcaggtgaacacggttgtg
agtggggctctggacaggctgcactatgagaaggacccctgtgtgaagtatgacatcgtc
cgcaagctgtggaactacctgcaccgcgaccgcggtcaggaggagtttgagaaaattcac
caggctcaagctaccgctgccaaggccagaaagacactgcagcagaaacctaaacctgca
tccaagccttctggcagtaaggaggacggtggtaagacctctggaggcctggaagctggt
gatatggggggtcccatgtccccaactcccagcacccctggaacccccaaatcacccctc
gcccctgtagccacaacccccaccaaagctgggatcccagattcagtcaagaccggtcct
ggttttctcttagtgtctcctccccccattcctcaactggggaccctgttgtccagcaac
cagtctggcccacagatctctcagccagcttcctcccagcactcagccagggtagtgggc
caccagtcaggctctccgcctcaggtacgagtggtctctgcccagacagcaagaggacag
caggccatgttggtgcaccagacccctcgacagatcagagtgccagtcaccgtgggtgct
aaggtcatcacacagaccgtggtgtcgttaccactaaggactctgtcttttggtagcccc
acccaggggcaggcagccagagggcagacgaccctgtcgatgtcaggcctgaccactgct
cagactggcttccctggcagccctgcacaccacccagcctcccccgctgtcctacaggga
gtcaccagccagaacatcatccaacaggtggccatcacaggccagatgggcgtgacggct
caaggtggagcagctattccaatacccgctacgaatctccgcatccaaggcaaagatgtg
ctccgcctgcccctctcctccatcaccacagactctaaaggacagacggtgctgcggatc
acacctgaaatgatggccaccctcaccaagtcccccgtcaccaccttcaaactcaccccc
gacatgttaggcaccgccaccaccaagagcatatctgctactctccatttgaccccaccc
caccactcctccccctgcagcccagcctcctcctcgggtgacgttctgacgagcaagacc
tacgctggcaccaccaccctgctgaaggctgcaggggacgctatgcgcctgatgcccacc
ctggcagtcactatggccgagcagaaggccagaaccttctccaccgtctcctcgtctgac
tcgaagagtggcaccaccatacgaataatgcccggcctcggggtcatcccacagaaacgg
ggtcaagccatcaccgtgacaaccaccaccggcagcaaacctgtctccactggggctgcg
actgtccccatagccaccagcggagtggccgtagctaaaggggtgacaattggcccttct
gcctcaggctctctgactcagggaacagccacagctactgtccgccaggtccccgtcaca
gccacagtggtgtccacacgaccagggaagctaccagctcggatcccagggcctctgtct
gtcctcagccaaccacttaaaagcaagtgtgggatgaccacgcccatactgaaaggaaac
atcagtacgaatatcagtagtctgggaaggaacatcatcctcaccgccatgcctgcaggc
accaagctgatagctgggaacaagccagtcagctttgtcacggcgcaagagttacagcag
ctgcagcaacaggggcaggccactcaggtgcgtttccggacggtgccagcccagcagctc
tctgcagctggctcccccaagtctgtgtccgctgccgtagtcaccaccgcaccctcgccc
aaacgaaccccggacccgccaccgccggcacagtga
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