Salvelinus namaycush (lake trout): 120057349
Help
Entry
120057349 CDS
T07522
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 2-like isoform X1
KO
K08618
a disintegrin and metalloproteinase with thrombospondin motifs 2 [EC:
3.4.24.14
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120057349
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.14 procollagen N-endopeptidase
120057349
Peptidases and inhibitors [BR:
snh01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
120057349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_CR_2
Pep_M12B_propep
Reprolysin
ADAMTS_spacer1
Reprolysin_5
Reprolysin_3
Reprolysin_2
TSP1_spondin
Reprolysin_4
ADAMTS_CR_3
PLAC
Peptidase_M10
Motif
Other DBs
NCBI-GeneID:
120057349
NCBI-ProteinID:
XP_038861859
UniProt:
A0A8U1C4X3
LinkDB
All DBs
Position
Sna12:47158061..47215707
Genome browser
AA seq
1378 aa
AA seq
DB search
MDVTPGFAFFIILLHLIHANGLYISNGIESLQHVLREYGVVKPVNTDSEGRFLSGAVSAP
QLDSQHQQAHRRWRREAVAASDPSHGDLEEGEGTARHRETLFYNVTVFGQELHLRLHLNS
RLVVPGAKVEWHEEGSQTTYEPLRDSDCFYVGEVTNVRDTSVAISNCDGLAGMIRTGKEE
FFIEPLVRGGGLTVEEEESGDGRHHIVYRSSAIKRPPVNQTADSHPRGSVIGDLMDLQAL
SRGVQQQHHNLIWNRTRQARARRQANEEHELFNIEVLLGVDSSVVHFHGREHIQKYLLTL
MNIVNEIYQDRTLGAHINVVLVRIIMLCPAKSMSLIELGNPSQSLENICRWAFLQQKEDR
SDPEYHDHAIFLTRQEFGPSGMQGYAPVTGMCHPVRSCTLNHEDGFSSAFVVAHETGHVL
GMEHDGPPGNECGDEVPMGSIMAPLVQAAFHRFHWSRCSQAELSKYLNSYDCLRDDPFDH
DWPALPQLPGIHYSMDEQCRFDFGAGYTMCTAYSTYDPCKQLWCSHPDNPFFCKTKKGPP
IDGTTCSPGKHCFKGYCIKLTPDILRQDGGWGTWSNFGSCSRTCGGGVRFRTRQCDNPTP
ANGGRTCYGNSYEFQLCNLEECSKPFADFREEQCKMWDPYFEYDNAKHHWLPYEHPDPDE
RCQLYCKSKETGDVVAMNRMVHDGTRCSYQDPYSTCVRGDCEVPYSQTLTQRISLQHVGC
DNQIASDMQEDKCGICGGDNSSCKIIKGNFTRSVKKQGFLKILEIPRGARHLLIQEFKGT
PHILAVKNQATGHLFLNNEDEFPESRMVIEKGVEWEYYNDDDTETVQTTGPLGYAVLVMI
RSHGDSKVTLSYKYILHEKLQSSIESNLVQEDTAYFEWALKKWSHCSKPCGGGKQYTRFG
CRRKSDGKMVHRTNCVNIDNLRAISRDCNQKECSQPVYVNAFIWITGDWEECSSSCGKTG
YQSRSVRCQQPLSGGGQRSIHSKYCNDDRPEGRRPCNRQLCPAQWRVGPWSQCSVTCGNG
TQERQVLCSTPDNSVGLCMETKPITLRTCQLVPCTGDGKKVLIQWLSRSNPEFPVPKISS
RQCKGDRSAFCRMEVLSRYCTNPGYRQMCCKSCAEGNFTTMGQNLTTGPWRYTTLPTPIN
GTYSTNPTTTLRPKPTAGIYSTDFAYVEHDDYGEYTTKTDEHNTSKTYRPTTAPGLTTRQ
PRKITTSPVTARSTPSPTTTTEETTFPRTSIITATTAEATTISTSQDPSTLRTTNVPKST
TAWVDVIERESRTTPAPSTSRPKGDKRRKTIPTQRRVVVTLMPSTIAPHRTEDKRENNPV
DVPYRIVGVDNEVFQNHFVPRIRPPFRETTRNKRIQELLAEKRRQDLLLRRAKRKPGP
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggatgttacgcctggatttgcattctttattattttactgcatttaattcacgcgaat
ggactttatatctccaatggcatagagtctctgcagcatgtcctgagggagtatggcgtt
gttaagcctgtgaacactgattcagagggccgcttcctctcaggtgctgtctctgcacct
caactggacagccagcaccagcaggcccacagacgctggagaagagaggctgtagccgcc
tcagaccccagccatggagacctggaggagggagagggtacagccaggcacagggagaca
ctcttctacaatgtcactgtgttcggccaggagctccacctacgcctgcacctcaactcc
aggctggtggtccccggagctaaggtggagtggcacgaggagggaagccagaccacctat
gagcctctacgggacagcgactgcttttatgtaggagaggtcaccaacgtcagggacaca
tccgtcgctatcagcaactgtgatggcctggcaggaatgatccgtacggggaaggaggag
ttcttcatcgagcccctggtgcgtggagggggtctgacggtagaggaggaggagagcgga
gacggacgacatcacattgtttatcgctcctctgccattaagaggccccctgtcaatcaa
acagcagactctcacccccgagggtcagttataggtgacctgatggacctgcaggccctg
tccagaggagtgcagcagcagcatcacaacctgatctggaacaggaccaggcaggctcgg
gcccgacgccaggccaacgaggaacacgagctgttcaacattgaggtcctactcggggtg
gactcctctgtggtccacttccatggcagagagcacatccagaagtacctcctcaccctc
atgaacatagtgaatgagatttaccaggatcgtaccctgggtgctcacatcaacgtggtt
ctggtccgtatcatcatgctgtgtcctgccaagtctatgagtctgatagagctgggcaac
ccgtctcagagtctagagaacatttgtcgctgggccttcctgcagcagaaggaagacagg
agtgatccagagtaccatgaccatgccatcttcctcacccgacaagagtttggtccctcc
ggcatgcaaggttacgctcctgtgacgggtatgtgccacccagtgcggagctgcactctc
aaccacgaggatggcttctcctctgccttcgtcgtggcacatgagactggacacgtgctg
ggtatggagcatgatggcccccctggtaatgagtgtggcgacgaggtgcccatgggcagc
atcatggcccctctggtgcaggctgccttccatcgcttccactggtcccgatgcagccag
gcggagctcagcaagtacctgaactcctatgactgtctccgtgacgacccctttgaccat
gactggccggcgttgccacagttaccagggatccactactccatggacgagcagtgtcga
tttgactttggcgccggctacaccatgtgcacggcgtacagcacctacgacccctgcaag
cagctctggtgcagtcacccagacaacccgttcttctgcaaaaccaagaagggtccgccc
atcgacggcactacgtgttcaccggggaagcattgcttcaaaggttactgcatcaagttg
accccagacattctaaggcaggatgggggctggggcacgtggagtaactttggctcctgc
tctcgcacctgtgggggtggtgtgcgcttccggacccgtcagtgtgacaacccgacccct
gccaatggaggacgcacctgctatggcaacagctatgagttccagctgtgcaacctagag
gagtgctccaagcctttcgctgacttcagggaggagcagtgcaagatgtgggacccttac
tttgagtatgacaacgccaagcaccactggctgccctatgagcatcctgaccctgatgag
agatgccaactctactgcaagtctaaggagacgggagacgtggtggccatgaacaggatg
gtgcacgatggcacacgctgctcctaccaagacccttacagtacatgtgtgcggggggac
tgtgaggtcccatactcccaaacactgactcagcgtatctctctacagcacgttggctgt
gataaccagatagcctcagacatgcaggaggacaaatgtgggatatgcggtggagacaac
tccagctgtaagatcatcaagggaaacttcactagaagcgttaaaaaacaaggtttcctc
aagatacttgaaatcccccgaggggccaggcatctgttgatccaggagttcaaggggacc
cctcacatcctagcggtgaagaaccaggccacaggtcatctgtttctgaataacgaggat
gagttcccagagtcccgtatggtgatagagaagggggtggagtgggagtactacaacgat
gacgacacggagaccgtccagaccacaggacctctgggatacgctgttctggtcatgatc
cgttcccacggtgactccaaagtgaccctctcctacaaatacattctccacgagaagctg
cagtcatccatagagagcaacctggtgcaggaggacacagcctactttgaatgggctctg
aagaaatggtctcattgctctaaaccctgtggaggaggtaagcagtacacacggtttggc
tgcaggagaaagtccgatgggaagatggtccaccgcaccaactgtgtgaacatcgacaat
ctcagagctatcagcagggattgtaaccagaaagagtgctcccagccagtgtatgtgaat
gcatttatttggatcactggggactgggaggagtgcagttcatcctgtgggaagactggc
taccagagccgctctgtacgctgtcagcagcccctctctggcggtggccaacgttccata
cacagcaagtactgtaatgatgacaggccagagggacgacgaccctgcaatcgccagctc
tgtcctgcccagtggagagtaggaccctggtcccagtgttcggtgacgtgtggcaacggg
acccaggagcgccaggttctgtgtagcactcctgataactcagttggactctgcatggag
accaaacccatcacactccggacctgccagctagtcccctgcacaggtgacggaaaaaaa
gttttgatccagtggctgtcacggtccaaccccgaatttcctgtacccaagatctcctca
aggcagtgtaaaggggataggtcagcgttctgtcgtatggaggtgctgagcaggtactgc
accaaccctgggtacagacagatgtgctgcaagtcctgcgccgaggggaacttcaccact
atgggccaaaacctcaccactgggccctggaggtacaccacactacccacccccatcaat
ggcacctattcaacaaaccccacaacaaccctcagacccaaacccaccgctgggatatat
agcactgactttgcttacgttgagcatgatgattatggggagtatacaaccaaaaccgac
gaacacaacacaagtaaaacatataggcctaccaccgcccctggattaaccactagacag
cccagaaaaataaccacctccccggttaccgccagaagtactccatctccaaccaccacc
accgaggagactacgtttcccagaacctccatcatcaccgccactaccgctgaagccacc
acaatctccaccagtcaggacccatcaactctcagaacgacaaatgtccccaagtccacc
acagcttgggttgatgtcattgagagggagtcccggacaaccccggctccatccacttcc
agacctaaaggagacaagagacggaagaccattccaacacagcgtagggtcgttgtgaca
ctcatgccctccaccatagccccccaccggacagaggacaagagggaaaacaacccggtg
gacgtgccgtatcggatcgttggtgtagacaatgaggtctttcagaaccactttgttcct
agaatacggcctccgttccgagaaacgacacggaacaaaaggatacaagagctcctcgcc
gagaaaaggaggcaagacttacttctcagacgagcgaaaagaaaaccaggaccttga
DBGET
integrated database retrieval system
