Salvelinus namaycush (lake trout): 120059298
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Entry
120059298 CDS
T07522
Name
(RefSeq) bile acid receptor-like isoform X1
KO
K08538
farnesoid X receptor beta
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120059298
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
snh03310
]
120059298
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120059298
Nuclear receptors [BR:
snh03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
120059298
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120059298
NCBI-ProteinID:
XP_038864177
UniProt:
A0A8U1EUJ7
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Position
Sna14:23947937..23961854
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AA seq
486 aa
AA seq
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MREWSESEMTMSAGGYLSAFDGYGISEPLQYYDVLGDPLGYSFQEPDLQGLAFSQQQYSP
VNLQFSVYEPPSSQPCHPPYTHPYSPHCLEAPCEPSPEPQCGGLGKGGGGGLPLVKRTRL
GPGGRVRGLDELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYRCKSGGGCEMDMY
MRRKCQDCRLRKCRAVGMLDECLLTEVQCQSKRLRKGAKHRGGGPEEEENMESRSVSSTN
RLLGQVVSANLSREQNHVLDRMVEALRQYRAQYTVHCRVFEWTCTEDGGDRLMDVASPPS
QRLLQFAKSVPGFELLNCSDQSTLLSSSSVEVMFLLSAQQFTQNPAAYSPALQPFNISTH
HWLKTLESKENIHSGTGPLNPGVNEDLLGPVINFFHSMAALGVTEAEYALLTATVLLCSA
DEASLRAVACVESLQELILELLSRVCGAWCGAQGPQGAQRFARLLGRLTELRTLQHNHLT
LLRQQP
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtggagtgagtcggagatgaccatgtctgccggtggttacctctccgccttt
gatggatacggcatctccgagcctctgcagtactacgatgtgctgggggaccctttgggc
tactctttccaggagccagacctacagggcctagccttcagccaacagcagtacagcccc
gtcaacctgcaattctctgtctacgaaccaccgtcctcccagccatgccacccaccctac
acccacccctacagtccccactgcctggaggctccctgcgagcccagcccggagccccag
tgtggaggcctggggaaggggggtggcggaggtctgcccctggtcaagaggaccaggctg
ggccctggagggcgggtgaggggcctggatgagctttgtgtggtgtgtggagacaaagcc
tctggctaccattacaatgccctcacctgtgaaggctgcaaaggttttttccgaaggagt
gtgacaaagaaagcagtgtaccggtgtaaaagtggcggaggctgtgagatggatatgtac
atgcggaggaagtgccaggactgccgcctgcggaaatgtcgtgctgtgggcatgctagac
gaatgtctgctgaccgaggtgcagtgccagtcaaagaggctgaggaagggagccaagcac
agaggaggagggcctgaggaggaggagaacatggagagcaggagcgtcagctccaccaac
aggctgctaggacaggtggtgtctgcaaatctgtcaagagaacagaatcatgtgctggac
aggatggtggaggctcttcggcagtacagggcgcagtacactgtacactgtagggtgttt
gagtggacttgtacagaggatggtggagacagactaatggacgtggcctcccctccctct
cagaggctgctgcagtttgccaagagtgtacctggctttgagctcctgaactgctcggac
cagagcaccctcctctctagttcctctgtagaagtcatgtttctgctctcagcgcagcag
ttcacccaaaacccggcagcctatagtccagcactacagcctttcaacatctcaactcat
cattggctgaaaaccttggagtccaaggaaaacattcatagtgggactggccctctaaac
ccaggagtcaatgaggacctgcttggaccggtgatcaacttcttccacagcatggcagca
ttgggggtgaccgaggctgaatatgccctgctcactgctacagtactgctatgctcagca
gacgaagcgtcgctgcgggcggttgcgtgtgtggagagcttacaggagctgatcctcgag
ctgctgtccagggtgtgcggagcctggtgtggagcccagggccctcagggagcccagcgc
ttcgctcgcctgttggggagactcacggagctgcgcacgctacaacacaaccacctcacc
ctgctccgacagcagccctga
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