Salvelinus namaycush (lake trout): 120061202
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Entry
120061202 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy-like isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
snh04144
Endocytosis
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120061202
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120061202
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120061202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120061202
04121 Ubiquitin system [BR:
snh04121
]
120061202
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120061202
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
120061202
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
HECT type E3
120061202
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
120061202
NCBI-ProteinID:
XP_038866752
UniProt:
A0A8U1EZ91
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Position
Sna16:complement(23313461..23333647)
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AA seq
884 aa
AA seq
DB search
MASSVAKPGPGNGYPMKAQLQIMVLSAKLKENRKNWFGPSPYVEVAVDGQSKKTEKCNNT
HSPKWKQPLTVIVTPFSKLIFRVWSHQTLKSDILLGMATLEVSETLKANDMKISEVVQTL
QLSADRDQTDVVGDLSVCLDGMQVDPEMFASAASANTQSTSNGESQQNGDDVKRSRDSSP
SVDGLEHRASPNGCAVAVNGTESCKGSPALSAGGSRGNPLRPPRPSRPPPPTPRRPTSSP
AASSNGSIPTEESDGPSSETPVSAPAVPDPNAPPPTHDQSQAIAASQADSVTPGPPRAPA
VAAGPLPPGWEQRVDQNGRLYFVDHVEKRTTWERPEPLPSGWERRVDPMGRVYFVDHITR
TTTWQRPTMETVRNYEQWQHQRNQLQGAMQQFNQRFIFGVNGLQDQVPATENKQFDPLGP
LPHGWEKRTDSNGRVYFVQHTTRTTQWEDPRTQGLLNEKPLPEGWEMRFTVDGIPYFVDH
NRRATTYIDPRTGKSSLENGPQITYVRDFKAKVQYFRFWCQQLSMPQHVKITVTRKTLFE
DSFQQIMSFNAQDLRRRLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDN
YCLQINPASYINPDHLKYFKFIGRFIAMALFHGKFIDTGFSLPFYKRMLNKPWALKDLES
IDPEFYNSLIWIKENDIEECGLEMYFSVDKEILGEITTHELKPDGGEVLVTEENKEEYIR
LVAEWRLSRGVEEQTQAFFEGFNEVLPQQYLQYFDAKELEVMLCGMQEIDLADWQRNTIY
RHYARSSKQVLWFWQLIKEMDNEKRMRLLQFVTGTCRLPVGGFADLLGSNGPQKFCIEKV
GKENWLPRSHTCFNRLDLPPYKSYEQLKEKLMFAIEETEGFGQE
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagcgttgctaaaccaggccctgggaatggctaccccatgaaggcacaactg
caaattatggtgctgtcagcaaaactgaaagaaaacaggaagaattggtttggccccagt
ccatatgttgaagtggccgttgatggacagtccaaaaagacagagaaatgcaacaacacc
cacagtcccaaatggaagcagccgctcacagtaattgtcactccttttagcaagctaatc
ttccgagtatggagtcaccagaccttgaagtcggacatattgttaggcatggcaactctg
gaggtcagcgaaacactcaaagccaacgacatgaaaatctctgaggtggtgcagacgctg
cagctgagtgcagacagagaccagaccgatgttgtgggggacctgtctgtctgtctggat
ggcatgcaagtggacccagagatgtttgcctctgctgcctctgctaacacccaaagtaca
tcgaatggggaatcgcaacagaacggggatgacgtgaagcggagtagagacagctctcct
tctgtggatggtttggagcacagagcttccccaaatggttgtgcggtcgcagtgaatggc
acagagtcttgcaaagggtctcccgctctgtcagcagggggctccaggggtaatcctcta
cgcccccccaggccctcccgaccccctccacccaccccgcgcagaccaacctcctctcca
gcagcatcctctaatggatccattccaactgaagaaagcgacggccccagctcagagacc
ccagtcagtgcacctgcagtaccagaccccaacgccccaccccctacacacgaccagagc
caagcaatagcagccagccaagcagacagtgtaaccccaggcccccccagagcccccgct
gtcgccgcaggcccattgcctcctggatgggagcagagggtggatcagaacggaaggctg
tatttcgtagatcatgtggaaaagaggacgacatgggagcggcctgagcctctaccttct
gggtgggagcggcgagtggaccccatgggcagggtctactttgtagaccacatcaccaga
actaccacatggcaacggcccactatggagacggtgcggaactatgaacagtggcagcac
caacgcaaccagctacagggtgccatgcagcagttcaaccagcgcttcatatttggagtg
aatgggctccaggaccaggttccagccactgagaataagcagtttgatcccctgggcccg
ctgccacatggatgggagaaaagaactgacagcaacgggagagtgtactttgttcaacac
accacacgaactacacagtgggaggaccctcgcactcaggggctgctgaatgagaagcct
cttccagagggctgggagatgaggtttacagtcgacggcatcccatactttgtggaccac
aacaggagagccactacgtacatcgaccctcgcactggaaaatcctcacttgaaaatggg
ccccagataacttacgttcgagactttaaagccaaagtccagtacttcagattctggtgc
cagcaattgtcaatgcctcagcacgtcaagatcactgtcacccgcaaaaccctgttcgag
gactcgttccaacaaataatgagcttcaatgcacaggacctccgcaggagactatggatc
atattccccggggaagaaggtcttgattatggaggggtggcaagggagtggttcttcctg
ctgtctcacgaggtgctgaaccccatgtattgcctgtttgagtatgctgggaaggacaac
tactgcctacagatcaaccctgcctcctacatcaaccctgatcacctcaagtacttcaaa
ttcatcggacgcttcatcgccatggctcttttccacgggaagttcattgacacaggcttt
tcgctaccgttctacaagcgcatgctgaacaagccatgggcactgaaagatctagagtcc
attgacccagaattctacaattctctcatctggattaaggagaacgacattgaggagtgt
ggcctggagatgtacttctctgtggacaaagagattctgggtgaaatcaccactcatgag
ctcaagccggacggaggagaggtcctggtcactgaggagaacaaggaggagtatatcagg
cttgtagcagagtggaggttgtccagaggtgtggaggagcagacccaggccttctttgag
ggcttcaacgaggttctcccacagcaatacctgcagtactttgatgccaaagaacttgag
gtcatgctgtgtgggatgcaggagatcgacctggcagactggcagaggaacaccatctac
agacactatgcacgcagcagcaagcaggtcctctggttctggcagctcatcaaagagatg
gacaatgagaagcggatgaggctcctccagttcgttacaggaacctgtcgccttcctgtc
ggaggctttgctgacctattggggagcaatggcccgcagaagttctgcatcgagaaggtg
ggaaaggagaactggctacccagaagtcacacctgcttcaatcgattggatcttcctcct
tacaaaagctacgagcagctgaaggagaaattgatgtttgcgattgaagagactgagggc
tttgggcaggagtga
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