Salvelinus namaycush (lake trout): 120064134
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Entry
120064134 CDS
T07522
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like isoform X1
KO
K06751
MHC class I antigen
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
snh04145
Phagosome
snh04218
Cellular senescence
snh04514
Cell adhesion molecules
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120064134
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120064134
04145 Phagosome
120064134
09143 Cell growth and death
04218 Cellular senescence
120064134
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120064134
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120064134
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
120064134
Exosome [BR:
snh04147
]
Exosomal proteins
Proteins found in most exosomes
120064134
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
Antigens
120064134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
ig
MHC_II_alpha
Motif
Other DBs
NCBI-GeneID:
120064134
NCBI-ProteinID:
XP_038870426
UniProt:
A0A8U1F6E0
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Position
Sna19:10272259..10285883
Genome browser
AA seq
397 aa
AA seq
DB search
MLGQILVLWVFLSLPTVSSVALKYFYRALSQSTGLPEFSAVAYLDEEPIYSYDSSTKEVV
ARQEWVKEAVDPDFWGRSTHILMETENVFKDNMNTARARFNQTSALVLQKLYKCEWDEET
GATDGHEQYGYGGEDFLLFDMKNERWIAPVRQGLITKMKWDDNVKLKAKIHYLTHTCIEW
LKKYVPYQRSMLERTVPPQVTLFQKNLSCPVTCHATGFYPKAIKIFWGRDGVEIHDDVVH
EETLPNGDGTYQKRTHLTVSPEDLQKYNYTCTVQHIRGDDVVLSANRDSIRRNIRRHYNI
TITIFMVFVLVTLVIGVVVIKRKGWKGKDPTAGKEKQCPTSLPEKNVLLLNDAKPAEMEK
PKMSHPADTLQCPNQDDWLRQIVQQKRYNFLKLFKSL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgttaggccaaatccttgtgttatgggtgtttctcagcctgcctacagtatcctcagtt
gccctgaagtatttttacagagcgctctcacaatctactggccttccagagttcagtgct
gttgcgtatttggatgaggaaccaatatattcctatgacagttctacaaaggaagtggta
gctcgacaggagtgggttaaagaagccgtggatccagacttctggggaagaagtacacac
attcttatggagactgagaacgtgttcaaagacaacatgaacactgcaagagctcgcttc
aaccagacaagtgccctagtattgcagaaactgtacaagtgtgagtgggatgaggaaacc
ggtgctacagatggacatgaacagtatggatatggaggagaggacttccttttatttgat
atgaagaatgaaagatggattgcacctgttcgtcagggactcatcaccaaaatgaagtgg
gatgataatgttaagcttaaagccaaaattcactatctaacccatacgtgtattgaatgg
ctgaaaaaatatgttccctatcagagaagcatgctggagaggacagtcccaccgcaggta
actttgtttcagaaaaacctctcctgtcctgtgacttgccatgcaacaggcttctacccg
aaagcaatcaagatattttggggaagagatggagtagagatccatgatgatgtggtgcat
gaagagaccctgcctaatggggatgggacgtatcagaagagaacccatctcactgtgtcc
cctgaagacctacagaagtacaactacacatgcactgtccaacacattagaggtgatgat
gtggttctgtctgctaacagggacagcattcgcaggaatattcgcaggcactacaacatc
accatcaccatcttcatggtctttgtattggtcacattggtcatcggtgttgttgtaata
aagagaaagggctggaaaggaaaagatccaacagctggaaaggaaaaacagtgtccaaca
agtctcccggagaagaatgttcttctgctcaacgatgcaaaacctgctgaaatggagaaa
ccaaaaatgagccatccagctgatactctccagtgcccgaatcaagacgactggttacga
cagatcgtccaacagaagcggtacaatttcctcaagctcttcaaaagtctctga
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integrated database retrieval system
