Salvelinus namaycush (lake trout): 120065592
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Entry
120065592 CDS
T07522
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04260
Cardiac muscle contraction
snh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120065592
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120065592
04261 Adrenergic signaling in cardiomyocytes
120065592
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120065592
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120065592
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA
VWA_3
VWA_2
dCache_1
Cache_3-Cache_2
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
120065592
NCBI-ProteinID:
XP_038872585
UniProt:
A0A8U1F9Y3
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Position
Sna20:complement(13296255..13338851)
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AA seq
994 aa
AA seq
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MLSTEEHHVTPWSSMFVTVIVPMLLFSACWSLTFPPSSLKAPVSCCLATCAHAVLSGGAV
AGSAMMCQKGFRRVRPRLCLKLGFRATSVLRDSSGTEVRGHCAGWSGGAVLASEVMGWGL
WEQQQYIQGASSPKDMIIIVDVSGSVSGLTLKLMKSSVIQMLDTLSDDDYVNVARFNEKA
DAVVPCFKTLVQATMRNKKIFKESIMNMQAKGTTDYKSGFQFAFEQLLNDTGAPRAGCNK
MIMMFTDGGEDRAQDIFEKYNWPNKTIRVFTFSVGQHNYDVTPLQWIACANKGFYYEIPS
IGAIRINTQEYLDVLGRPMVLAGPKAKLVQWTNVYQDALGLGLVITGTMPVFNLTADANS
QTQLVLGVMGVDVAINEIKRKTPTYRLGANGYTYAIDKNGYLLLHPNLQPKIINFREPVT
LDFLDAELEDSKKEEIRRDMIDGKSGQRKITTLIKSVDERYIDEAIRTYTWTPVEGTDYS
LGLVLPTYSENHIKANLSDQILQVQYNLPLSVADFESLLPNSFESEGHVFIAPREYCNEL
ELSNNNTDFLLNFIALMEKVTPDSKQCDNLLLHNLILDTGIIRQLVEKVWKTKDLNTYGF
LAVFAATDGGITRVFPNKAAETWEEDPEPFNASYYRRSLDNKGYIFRAPYRTLNDELLNP
ENDTIGILVSTAVEITVGGKTIKPAVVGVKLDLEAWVDKFKILASNQTSPTSDNRQVQQT
CGPTSGCEMDCDANSEDLLCYLVDDGGFLIMSNQKDYWNKIGMFFSEVDPYLMHALYNNS
FYNRKQSFDYQSVCDPVPSSNTGAAPRGVFVPTIADFVNLAWWTSAAAWSLFQQLLCGMA
YHSWFVTDEVEAEGMDSRETSCVTIQTQFYFTNINSSYDILQDCGNCSRLIHAKRLNNTN
LLFVVAEKMPCNTCEVEKLSQAETEFKDDNPSCEDMSAARYRKGPTVCYDYNLAENTSDC
GRGHSFRPSFQTLLTIQLILLYPIASTHILPLLL
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgctttccactgaagagcaccatgtcaccccctggtcctccatgtttgtcactgtcatt
gttcccatgcttctcttctctgcctgttggtctctgactttccctccgtcctctctgaaa
gctcctgtgtcctgttgcctagcaacctgtgcccatgccgtgttgagtggcggggccgtg
gcagggagtgccatgatgtgtcagaaaggtttcaggagagtgaggccccggttgtgtttg
aagctgggattcagggccacgtcggtgctgagggacagcagtggaacagaggtcaggggt
cactgtgcaggttggagtggtggcgcggtgcttgccagtgaagtgatgggctggggcttg
tgggagcagcaacagtacatccaaggggcatcctctcccaaggacatgatcatcattgtg
gatgtgagtggcagtgtcagtggactcactctgaagctgatgaagtcctctgtgatacag
atgctagacactctgtcagatgatgactatgtgaatgtagccaggtttaacgagaaggca
gatgccgtggtcccctgctttaagaccttggtccaggccaccatgagaaacaagaagatc
ttcaaggagtccatcatgaacatgcaagccaaaggaaccactgactacaagtctggcttc
cagttcgccttcgaacagctactcaatgataccggcgccccgagggcgggctgcaataag
atgataatgatgtttacagatggaggagaggatcgtgcccaggacatttttgagaagtac
aactggcccaacaaaaccattcgagtgtttaccttttcagtcgggcagcacaactatgat
gtcacgcctttgcagtggatagcttgtgccaataaaggattctactacgagattccatcc
attggcgccatcagaattaacacgcaggagtacctggatgtgctgggtcggcccatggtg
ctggctgggcccaaggccaagctggtccaatggaccaacgtctaccaggatgctctgggt
ctgggtctggttatcactgggaccatgccggtcttcaacctcaccgctgatgcaaactct
cagactcagctcgtccttggtgtcatgggagtggatgttgcgatcaacgaaattaagagg
aagacaccaacatataggcttggagccaatggatacacgtatgcaatcgacaaaaatggc
tatttgctcctgcaccccaacttgcaacctaagatcattaacttcagagagcctgtcact
ctggacttcctggatgctgagctggaggacagtaagaaggaggagatccgtcgtgacatg
attgatggaaaatcagggcaaaggaaaatcacgaccctcattaagtcagttgatgagagg
tacattgatgaggctatacggacatacacctggacaccggtggaaggcacagattacagt
ctcgggctggtactgcccacgtacagtgagaaccacatcaaggctaacctgagtgaccag
atcctgcaggtgcagtataatcttcccctttctgttgcagattttgaatctctgctgcca
aacagttttgagtctgaaggacatgtattcatagctcccagggaatactgcaatgagctg
gagctctccaacaacaacactgacttcctgctcaacttcatcgctctcatggagaaggtg
actcctgactccaaacaatgtgacaacctgctccttcacaacctcatcctggacactggc
atcatcagacagctggtggagaaggtgtggaagaccaaagacctcaacacatatggcttt
ttggccgtgtttgctgccacagatggagggattacaagagtttttcccaacaaggctgct
gagacctgggaggaggaccctgagccttttaacgccagctattaccgccgcagtctggac
aacaagggctacatcttcagagcgccttatcgtaccttgaatgatgagctgctgaaccca
gagaacgacaccatagggatcctggtcagcactgcagtggagatcacagtgggagggaag
acaatcaaacctgcagtggttggagtaaagctggatcttgaggcctgggtggacaaattc
aagatcctggctagcaaccaaacaagtccaacaagtgacaaccgccaagtccaacaaacg
tgtggaccaaccagtggctgtgagatggactgtgacgccaacagcgaagacctgctgtgt
tacctagtggatgacggtggtttcctgatcatgtccaatcagaaggactactggaacaag
attggcatgttcttcagtgaggtggacccctacctgatgcatgctctctacaacaactcc
ttttacaaccggaagcagtcctttgactaccagtctgtgtgtgacccggtgccgagcagc
aacaccggggctgcaccaagaggagtctttgtgcccaccattgcagactttgtgaacctg
gcctggtggacatcagcagctgcctggtccctatttcagcagctgctctgtggaatggcg
taccacagttggtttgtcacagatgaggtggaggcagaggggatggactccagagagacc
agctgtgtgacgatacagactcagttctacttcaccaacatcaacagttcctatgacatc
ctgcaggactgtggcaactgctccaggctgatccatgccaagaggttaaacaacaccaac
ctgctgtttgtggtagcagagaagatgccctgcaacacttgcgaggtggagaaactgtcc
caggcggagacagagttcaaggacgataacccatcatgtgaggatatgagtgcagcgagg
tatcgaaaagggccaactgtgtgctacgactacaatctcgctgagaacacatctgactgc
gggcgcggccactccttccgcccctccttccagaccctgctcacgattcagctcatcctg
ctctatccaatcgccagcacccatattctgcccctcctactttaa
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