Salvelinus namaycush (lake trout): 120065824
Help
Entry
120065824 CDS
T07522
Name
(RefSeq) sphingomyelin phosphodiesterase 3-like
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00600
Sphingolipid metabolism
snh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120065824
Enzymes [BR:
snh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
120065824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
120065824
NCBI-ProteinID:
XP_038872801
UniProt:
A0A8U1FA83
LinkDB
All DBs
Position
Sna21:22196961..22216061
Genome browser
AA seq
673 aa
AA seq
DB search
MVLHTSPYSSAFLQCLTSLSWGFIFPCYWLLDRLLASCVATSLEKRRRSQDPCSFVTLYV
LVSTPLYLLLLLASLPFALLGFLLWAPLQAARHPYLYTHRRPNKHQAEQGGAASLADWRP
QGRSFCFGSANVCLLPDSLARFNNLSETQRRACEVGKRIRNGASRPQIKIYIDSPTNTSI
SAVSFSSLVTGFPRTSSLDQRPDNTAESEPLTECPVHNASADCPIHTASADCPIPTAGDD
CPIHPTGDQSSSDCPVHVAGGEKTPECPLHTAGAHNSSDCPVHTTVAQNSPDCSMHASGV
QISISAPDPDPPEAETGNHQGEGDAESLTGGVPSNNTLSHRTSMFKKHSGRKRRQGDDGI
DHEISAFFPANLDFLCLQEVFDHRATSRLRRQLHHYFPYILSDVGRYAWKDCCSRFKFLN
SGVMLVSRYPILDAHYECYPNGRGEDALAAKGVLFVKVQVGTSHQEQRVVGYLTCTHLHA
IEGDAAVRCEQLDLLLEWGTDFRKATSRPSEEKGLEDQVAFDVVLGDLNFDNCSSEDKLE
QQHSLFTQYKDPCRLGPGEDKPWALGTLLDTSGLYDEEVSSPESLQKVMENEEGRKEYLV
FPTNKNQCPNQKGRKIPLKGNGRRIDYILYSEAVQQDWKVDIEEFGFITQLAGLTDHLSV
AMRLAVSTGEEEP
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggtcctccacacctctccctactccagtgccttcctgcagtgcctcactagcctgtca
tggggctttatcttcccttgctactggctgctggaccgcctgctagcctcctgtgtggcc
acctctctggaaaagcgccggcgctcccaggacccctgctcctttgtgacgctgtatgtg
ctggtgtccactccgctctacctgctgctcctcttggcctcgctgccctttgctctgctg
ggattcctgctgtgggctcccctgcaggcggcccgccatccctatctctacacccaccgc
cgcccgaacaagcaccaggccgagcaggggggcgcggcatcactggccgactggaggccg
caaggccgcagcttctgcttcggcagtgccaacgtgtgcctactgccagactccctggca
cgcttcaacaacctgtctgagacccagcgccgtgcctgcgaggtgggaaagcgcatccgt
aacggggccagccggccgcagatcaagatatacatcgactccccgaccaacacctccatc
agcgccgtctccttcagcagcctggtcacggggttcccacgcacctcctcactggaccag
cggcctgacaacacagccgagtccgaacccctcactgagtgccctgtacacaatgctagt
gcagactgcccaatacacactgccagtgcagactgccccatacccaccgctggtgacgac
tgccccatacacccaacaggggaccagagctcctcagattgtcccgtccatgtagctggt
ggagagaaaacaccagagtgtccgcttcacactgctggtgcccataacagctctgactgc
cctgttcacaccacagtggcccagaactccccagattgctccatgcacgcctctggggtc
cagatcagtatcagtgcaccagatccagaccccccagaggccgagacaggaaaccaccaa
ggcgagggtgacgcggagagcctgacagggggggtgccttctaacaacaccctgtcccac
cgcacctccatgttcaagaagcacagcggccgcaagcggcgccaaggcgacgacggcatc
gaccacgagatctcggccttcttccctgccaacctggacttcctgtgtctgcaggaagtg
tttgaccaccgggccacgtccaggctgaggcggcagctgcaccactacttcccctacatc
ctgagtgatgtgggccgctacgcctggaaggactgctgctcccgcttcaagttcctcaac
agtggcgttatgctggtcagccgctaccccatcctggacgcccactatgagtgctaccct
aacgggcgaggggaagatgccctagcagccaaaggagttctctttgtcaaggtgcaggtg
ggaacctcccatcaggagcagagagttgtgggatacctcacctgcactcatctacacgcc
attgaaggagatgcagctgtgcgttgtgagcagttggatctactcttggagtgggggacg
gatttccgcaaggcaacgtcccgcccctcagaggagaagggtctggaggaccaggtggcc
tttgatgttgtcctcggcgacctcaatttcgacaattgctcttcagaggataaactggag
cagcagcattccctcttcacgcagtacaaggacccgtgtcgcctggggccaggggaggac
aagccatgggctctgggaacactactggacaccagtgggctttatgacgaggaggtcagt
tcaccagagagtttacaaaaagtgatggagaatgaggaggggaggaaggaatacttggtg
ttccctaccaataaaaaccaatgtcctaatcagaagggcagaaagatccccctgaaaggc
aacgggaggaggatcgactacatcctttacagtgaggcggtgcagcaggactggaaagtg
gacattgaagagtttggcttcatcacccagctggccggcctcactgaccacctgtctgtg
gccatgcgtctggctgtgtccacaggagaggaggagccttag
DBGET
integrated database retrieval system
