Salvelinus namaycush (lake trout): 120066105
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Entry
120066105 CDS
T07522
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120066105
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120066105
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Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
KorB
ACCA
HSP70
Not3
Motif
Other DBs
NCBI-GeneID:
120066105
NCBI-ProteinID:
XP_038873153
UniProt:
A0A8U1H7B0
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Position
Sna21:13586538..13592256
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AA seq
523 aa
AA seq
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MGCINESWDQDDRKGVYSCPQCRQTFTPRPVLGKNTLLNELVEKLKKTGLQAAPPACCYA
GPLDVGCDICAGRNLKAAKSCLLCLASYCETHLKLHNDLNQGKNHKLIDATCLQEKICTR
HDKLLEVYCRTDQQCICLLCVMDDHKGHDIVAAAEERTEKQKQLGENNLKSQQRIQEREK
EMQELRQAVDSLKRSAQAELFDSERTLTELIHSVEKRRSEVKELISAQEKAQVSRAKRHL
KQLEQEVAGLRWRDAELKHLSHTEDHIHFLQHFQSLCVPLGSEGTPSIIVTFKHVKKFLA
ELKERLQDICKEEMDRIYGKVAKVPNVRPSKPETREEFLEYCCPLTLDPKTAHQLLCLSE
GNRKVTRNHKIQAYPNHEHRFSHWKQVLCREGVWRVSEPCYWEVEWTGVEVDVAVSYKGI
SRRGSGCECWFGANDQSWRLYCSASRCCFYHNGKETSIPAIRSDSRVGVYLDHGAGTLSF
YSVTVSDTMTLLHGVKTIFTQPLYPGFGVGSSVRIVTPFLSSN
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcattaacgaaagctgggatcaggatgatcggaaaggtgtctacagctgtccc
cagtgcaggcagaccttcaccccaagacctgttctggggaaaaatactctactgaacgaa
ttggtggagaaactgaagaagaccggactccaagctgctcctcctgcttgctgttatgct
ggacctttagatgtggggtgtgacatctgtgctgggagaaacctcaaagctgccaagtcc
tgtctgctgtgtcttgcctcttactgtgagactcacctaaaacttcacaatgacctcaac
caaggaaaaaaccacaagttgattgatgccacttgtctacaggagaagatttgcactcgc
catgacaaactgctggaggtttactgccgtacagatcagcagtgtatctgtctgctgtgt
gtgatggatgatcataaaggccatgatatagtcgccgctgcagaagaaaggactgaaaaa
cagaagcagttgggggaaaataatctgaaatcccagcagagaatccaggagagagagaag
gagatgcaggagctgagacaggctgtggactctctgaagcgctctgcacaagcggaattg
tttgacagtgagaggaccttgactgagctcatccactccgttgagaaaaggcgctctgag
gtgaaggagctgatcagcgcccaagagaaggctcaagtgagtcgagctaaaaggcatctg
aagcaactggagcaagaggtcgctggactgaggtggagagatgctgagctaaagcacctg
tcacacacagaagatcacatccatttcctccagcatttccagtcactctgtgtccctctt
ggatctgagggcacacccagcatcattgtcacgtttaagcatgtgaagaaatttctcgct
gaactgaaagagcgactacaagacatctgcaaggaggaaatggacagaatatacgggaaa
gtggctaaagttccaaacgttcgcccttctaagcccgagaccagagaggagttcttagaa
tactgctgcccgctgacattggatcccaagacagcacatcaactcctgtgtctgtctgag
gggaacagaaaggtgaccaggaatcataagatccaggcctatcccaaccatgaacataga
tttagccactggaaacaggtgttgtgtagagagggtgtctggagggtgtctgaaccctgc
tactgggaggtagagtggaccggggtggaggttgatgtagctgtctcatataaagggatc
agcaggagaggaagtggttgtgagtgttggtttggtgctaatgaccagtcctggaggttg
tactgctctgcatctagatgctgtttctaccataatggtaaagagacttctatccctgcc
atccgctcagattccagagtcggagtgtacttggaccacggggcaggaactctgtccttt
tacagcgtgaccgtctcagacaccatgaccctccttcacggagtcaagaccatattcact
cagcccctctaccctgggtttggggttggttcatctgtgaggatagtgacaccatttttg
agtagtaactaa
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