Salvelinus namaycush (lake trout): 120066622
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Entry
120066622 CDS
T07522
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120066622
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120066622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-RING_6
zf-C3HC4_3
zf-RING_5
zf-RING_2
U-box
DUF4239
Y1_Tnp
LMBR1
Wtap
Fib_alpha
UPF0239
Gp58
Exonuc_VII_L
Mt_ATP-synt_D
Motif
Other DBs
NCBI-GeneID:
120066622
NCBI-ProteinID:
XP_038873976
UniProt:
A0A8U1H9H2
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Position
Sna21:complement(12520658..12533956)
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AA seq
552 aa
AA seq
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MAQQGVLLDQDQFCCSVCLDLLKEPVTTACGHSYCWRCIEDCWDKNVLKGVYSCPQCRQT
FTPRPTLRKNNMLAEVVEKLKKTVLQAATPPTLCYAGPGDVACDFCTGTRKQKALMSCLA
CLASYCETHLQPHYEVPAFKKHKLIKATAQLQEKICSHHDKLLEFYCRTHQQCICMLCVM
DVHKGHDTVSAAAERTEKQKQLGMSQQKVQQRVQKREKELKELQQAVESLKHSAQAAVED
TEKIFTQLIRSIERRCSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRNAELDQLSH
TEDHIHFLQSYQSLSSPSVSSDFPSITVRPLQFFGYVSKTVSELREKLEYFLKGEWTKIS
TTVDVLPTEPKTREQFLQYSCQLTLDPNTACEELFLTEGKRKVIFTDQAQPYPNHPDRFT
NYYQVLCREGLSGCCYWEVEWSGHWVHTAVSYKDISRTRAGHAFGSNDKSWSLGCSTGGY
RFIHNNVVTNVPGPLSSRVGVYLDHKAGTLSFYSVSDTMNLLHRVHNTFPQPLYPGFRLY
GANDTAELCKLW
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaaggagttctcctggatcaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccagtcactactgcctgtggacacagttactgttggaggtgtattgag
gactgctgggataagaatgttctgaaaggggtctatagctgtccccagtgcagacagacc
ttcactccaaggccaactctgaggaaaaataacatgttggctgaggtagttgagaaactg
aagaagacagtactccaggctgctacccctcctactctgtgctatgctggacctggagat
gtggcgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggcg
tgtttggcctcttactgtgaaactcacctccaacctcactatgaagttcctgcctttaag
aagcacaaattgattaaagccacagctcaactacaggagaagatctgctctcatcatgac
aaactgctggagttttactgtcgtacacatcagcagtgtatctgtatgctgtgtgtgatg
gatgtacataaaggccatgatacagtgtcagctgcagcagagagaactgagaaacagaag
caactggggatgagtcagcagaaggtccagcagagagtccagaagagagagaaggagttg
aaggagctccaacaggctgtggagtctctcaagcactctgcacaggcagcagtggaggac
actgagaagatctttactcagctgatccgctccattgagagaaggtgctctgaagtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaggctgaaggacttctggagcaa
ctgaagcaggagatagctgaactgaggaagagaaacgctgagctggaccagctctcacac
acagaggaccacatccatttcctgcagagttatcagtctctctccagtcccagtgtatct
tcagactttcccagcatcactgtccgtcctcttcagttctttggatatgtgagtaagaca
gtgtctgagctgagagagaaactagaatacttccttaaaggagaatggacaaagatctcg
actacagtggatgttttgcctacagagcccaagaccagagaacagttcttacaatattcc
tgtcagctcacactggacccaaacacagcatgtgaagaactctttctgactgaagggaag
agaaaggtcatctttacagatcaagcccaaccatatcctaaccatccagacagattcacc
aactactaccaggttctgtgtagagagggtctgtctggatgctgttactgggaggtggag
tggagtgggcactgggttcatacagcagtctcatataaagacatcagcagaacaagggca
ggtcatgcattcggatccaatgacaagtcctggagtttagggtgctctacgggtggttat
cgtttcatacacaataatgttgtgactaatgtaccgggccctttgtcctccagagtggga
gtgtacctggatcacaaggcaggtactctgtccttctacagcgtctctgacacaatgaac
ctcctccacagagtccacaacacatttcctcagcccctctatcctgggtttcgtctctat
ggagctaatgatactgctgagctgtgtaaactgtggtag
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integrated database retrieval system
