Sulfuriferula nivalis: SFSGTM_01960
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Entry
SFSGTM_01960 CDS
T06628
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sniv
Sulfuriferula nivalis
Pathway
sniv00521
Streptomycin biosynthesis
sniv00523
Polyketide sugar unit biosynthesis
sniv00541
O-Antigen nucleotide sugar biosynthesis
sniv01100
Metabolic pathways
sniv01110
Biosynthesis of secondary metabolites
sniv01250
Biosynthesis of nucleotide sugars
Module
sniv_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sniv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SFSGTM_01960 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SFSGTM_01960 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SFSGTM_01960 (rfbC)
Enzymes [BR:
sniv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SFSGTM_01960 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
PepX_C
Motif
Other DBs
NCBI-ProteinID:
BBO99487
UniProt:
A0A809RZ53
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Position
complement(201055..201597)
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AA seq
180 aa
AA seq
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MNIIPTEIPDVLIIEPKVFGDERGFFYESYNRKVMTAAGIPDDFVQDNHSRSARGVLRGL
HYQTQHTQGKLVRVISGSVYDVAVDLRKSSPTFGKWVGVELSAENKRMAWIPPGFAHGFV
VTSDNAEFLYKTTDYWAPEFERSLLWNDPALGITWPLTGEPTIAAKDAAGLPFSQCEVFP
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaatattatcccgactgagatccctgacgtgctcatcatcgagcccaaagtttttggt
gacgagcgtggttttttctatgaaagctataaccgcaaggtcatgactgcagcgggtatc
cctgatgactttgtacaggacaaccattcgcgttcggcacgtggcgtgttgcgcggcttg
cattatcagacccagcatacgcaaggcaaactggtgcgggtgattagcggcagcgtgtat
gacgtcgctgtcgatttgcgcaaatcgtcgcctacgtttggcaagtgggtcggggtagag
ctttccgccgagaacaaacgtatggcgtggataccgcccggctttgcccatggctttgtg
gtcacgtcagataatgcagaattcctctacaaaaccaccgattactgggcacctgaattt
gaacgcagcctgctgtggaatgaccctgcactgggcattacctggccgctgacaggcgag
cctacgattgctgcgaaagatgccgctggtttgccattttctcagtgtgaggttttccca
tga
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