Sphingomonas sp. NIC1: A7E77_13560
Help
Entry
A7E77_13560 CDS
T04479
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
snj
Sphingomonas sp. NIC1
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snj03009
]
A7E77_13560
Enzymes [BR:
snj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
A7E77_13560
Ribosome biogenesis [BR:
snj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
A7E77_13560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF6494
Motif
Other DBs
NCBI-ProteinID:
ANC87834
LinkDB
All DBs
Position
complement(2868591..2869973)
Genome browser
AA seq
460 aa
AA seq
DB search
MADPKDPRTPAAAGKTPGDRIAKLLARAGVASRREIERMIAEGRVALDGTVLDTPATVLT
SLRGVTVDGQPVGSPEPTRLFLYHKPTGLLVTERDPKGRPTIYDRLPHDLPRLVPVGRLD
LNTEGLLLLTTDGGFKRQLELPATGVERSYRARAYGNVTQQQLEELAEGVEIEGIRYGSI
DANIERRTGANVWIEITITEGKNREVRRVLEHLGLQVSRLIRTRYGPFVLGDLPVGGIGE
VKQHEIVGFRKTLKGGAPDEPIAAAPRAGFRTAPSVDRTTRTRRGAERGVERPATVRPTT
PGERPTRSRPRAEGGADRPAPARTAKPRAPATGEAPRPGFRTPATTDRGARTRTRTDARP
RDDARDGKANVPTGGSAMKPWERHDERGADRSSDRNRSGAPRFGQGKPGASRTGQRPPRG
DAPTRSGPAGSGGSPHPSGGRPPGGGFKGGPKGGPRGGRS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccccaaagacccccgcacccctgcagccgcgggcaagacacccggcgaccgg
atcgcgaaactgctggcccgcgcgggcgtcgccagccggcgcgagatcgaacggatgatc
gccgaagggcgcgtcgcgctcgacggcacggtgctcgatacccctgccaccgtgctgacg
tcgctgcgcggcgtgaccgtcgatggccagcccgtcggctcgcccgaaccgacgcggttg
ttcctgtatcacaagccgaccggcctgctggtcaccgaacgcgaccccaaggggcggccg
acgatctacgatcgcctgccgcacgacctgccgcggctggtgccggtcgggcggctcgac
ctcaataccgaggggctgctgctgctgaccaccgacggcgggttcaagcgccagctggag
ctgcccgcgaccggtgtcgagcgcagctatcgcgcgcgcgcctatggcaacgtcacgcag
cagcagctcgaggaattggccgagggcgtcgaaatcgagggcattcgctacggctcgatc
gacgccaatatcgagcggcgcaccggcgccaacgtgtggatcgagatcacgatcaccgaa
ggcaagaaccgcgaggtgcgccgcgtcctcgaacatctggggctgcaggtcagccgcctg
atccgtacccgctacggcccgttcgtactcggcgacctgccggtcggcgggatcggcgag
gtgaagcagcatgagatcgtcggcttccgcaagacgctgaagggcggcgcgccggacgag
ccgatcgcggccgccccccgtgccggcttccgcaccgcgcccagcgtcgatcgcaccacc
cgcacgcgccgcggcgccgagcgtggcgtggagcggccggcaaccgtacggccgaccacc
ccaggcgagcgcccgacgcgatcgcgccctcgcgccgaaggtggcgcggaccgtcccgcc
cccgcccgcaccgcgaagccgcgcgcccccgcgaccggcgaagcgccccgccccggcttc
cgcacccccgcgacgaccgatcgcggcgcccgcacgcggacccgaaccgacgcgcgcccc
cgcgacgacgcccgcgacggcaaggccaacgtccccaccggcggctcggcgatgaagccg
tgggagcgtcatgatgagcgcggcgccgatcgcagcagcgaccgcaaccgctcgggtgct
ccccgcttcggccaaggcaagcccggcgcatcccgcaccggccaacgacctccccgcggt
gacgccccgacgcgcagcggccccgcgggcagcggcgggtcgccgcacccatcgggcggg
cgtccgcccggcggtggcttcaagggcgggccgaagggcggaccgcgcgggggccgctcg
tga
DBGET
integrated database retrieval system
