Staphylococcus nepalensis: BJD96_04890
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Entry
BJD96_04890 CDS
T05272
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
snl
Staphylococcus nepalensis
Brite
KEGG Orthology (KO) [BR:
snl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snl03009
]
BJD96_04890
Enzymes [BR:
snl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BJD96_04890
Ribosome biogenesis [BR:
snl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BJD96_04890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
Methyltransf_25
Cons_hypoth95
N6_N4_Mtase
MTS
Met_10
TRAM
Methyltransf_11
PrmA
Methyltransf_23
PCMT
Methyltransf_4
PDGF
Motif
Other DBs
NCBI-ProteinID:
ATH59714
UniProt:
A0A291JIK2
LinkDB
All DBs
Position
1074839..1076200
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AA seq
453 aa
AA seq
DB search
MKTLQKNERLEGKVVDLTHEGHGVVKLDRYPIFVPNALINEIITFKVIKVKKNFAIGKLI
EIKEPSSDRVEPPCVYYYKCGGCQLQHMTYQAQLNMKKEQVINLFHRKAGFKDTIIHDTV
GMEHPWYYRNKTQVPVGKNQEGKIISGFYRQRSHDIIDMDECLIQDQLHQQVMNQIKAWF
NELNISVYNEHKKQGLMRHVVVRTGHYSRELMVIFVTNGKKFKQSDLLVQKMVDAFPYIT
SIKHNINNTHSNVIMGSESYTLYGKDAIHDTLSDVTFKISDQSFYQINSIQTEKLYQRAI
EYAELNGEDIVLDTYCGIGTIGLYMAPQAKHVYGVEVVSEAIEDAKQNATINQYENTTFV
CGKAEEVILKWKARGIKPDVVMVDPPRKGCDDTFLETLLELNPRKIVYISCNPSTQQRDA
QHLAKQYKLTQITPVDMFPHTTHVETVAQFEHI
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacattacaaaaaaatgaaagattagagggaaaagtggttgatttaacacatgaa
ggacacggtgttgttaaattagatcgttatcctatttttgtacctaacgcgttaataaat
gaaataattacatttaaggtaatcaaagttaaaaagaattttgccattggaaaattaata
gaaataaaagagccaagcagcgatcgtgttgaaccaccatgtgtatactattacaaatgc
gggggttgtcaattacaacacatgacataccaagcgcaattaaatatgaaaaaagaacaa
gtgattaatttgttccataggaaagccggctttaaagatacaatcatccacgacactgtg
ggaatggagcacccctggtattaccgtaataaaactcaagtgcccgtaggtaaaaaccaa
gaaggaaaaataatttccggtttttatagacagagaagtcatgacattatagatatggat
gaatgcttaattcaagatcaactgcatcaacaagtgatgaatcaaataaaagcttggttt
aatgaattaaatataagtgtttataacgaacataaaaagcaagggcttatgagacatgtt
gtagtaagaactgggcactattcaagagaattaatggtgatttttgtgacaaacggaaaa
aaatttaaacagagcgatttacttgtccaaaaaatggttgatgcgtttccttatatcaca
agtattaaacacaatattaataatacacattccaacgtaataatgggatcagaatcttat
actttatatggtaaagatgcaattcatgatactttatcagacgttactttcaaaataagt
gatcaatctttctaccaaattaactcgatacaaactgaaaaattatatcaacgcgcaata
gaatacgcagagttgaatggtgaagatatcgtacttgatacgtattgtggcattggtacg
attgggttatatatggcgccacaagccaagcatgtttatggcgtagaagtcgtttcagaa
gccattgaagatgcaaaacaaaatgcgaccataaaccaatatgaaaatactacttttgtc
tgtggaaaggcagaagaagttattttaaaatggaaagcacgaggaattaaaccagatgta
gtgatggttgacccacctagaaaaggctgtgacgatacctttttggaaacacttttagaa
ttaaatccaagaaaaatcgtctatatatcttgcaacccgtcaacacaacaacgggatgca
caacatttagcaaaacaatataagttaacacaaattacaccagttgatatgtttccacat
acaacacatgttgaaactgttgctcaatttgaacatatttaa
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