Staphylococcus nepalensis: BJD96_06555
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Entry
BJD96_06555 CDS
T05272
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
snl
Staphylococcus nepalensis
Brite
KEGG Orthology (KO) [BR:
snl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snl03019
]
BJD96_06555
03009 Ribosome biogenesis [BR:
snl03009
]
BJD96_06555
Enzymes [BR:
snl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BJD96_06555
Messenger RNA biogenesis [BR:
snl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BJD96_06555
Ribosome biogenesis [BR:
snl03009
]
Prokaryotic type
rRNA helicases
BJD96_06555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ATH59980
UniProt:
A0A291JK93
LinkDB
All DBs
Position
1402187..1403518
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AA seq
443 aa
AA seq
DB search
MANHPFDKFNLEPTLIEAVQNLNFNQPTEVQNRVIPKILKQVNLIGQSQTGTGKSHAFLL
PLVHLINIDIKEPQAIIVAPTRELAQQLFDVANHLAEYKKGVSVKLFIGGTDIEKDRQRA
KNQPQLVIGTPTRINDLAKHGDLHVHLASYLVVDEADLMIDLGLIDEVDHIATRLDDGSH
LAVFSATIPKSLHPFLNKYLENPDYVEIESTQKNKKNIEFYLIPTKGEAKIEKTIKLIDI
LNPYLCIIFCNSRDSADELADQLNTAGLKLGMIHGGLTPRERKQQMKRIRNLEFQYVIAS
DLASRGIDIEGVSHVINFDVPNDIDFFTHRVGRTGRGQYKGVAITLYSPEEEENIALIEQ
RGYHFENVDIKNDEIKSIKAHNTRQSRKNKDDHLTNELKYKVKRNKKKVKPGYKKKFQRD
LEHLKRQERKKFSKKQNRQARKK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcacccatttgataagtttaatttagaaccgactttaatagaggcggtacaa
aatttgaactttaatcaaccaacagaagttcaaaaccgcgttattcccaaaatattaaag
caagtcaatttaatcggacaatcccagacaggcacaggcaaatcacatgcctttttatta
ccattggtacacttgattaatatagatattaaagaacctcaggctattattgtagcgcca
actcgagaattagcacagcaactctttgatgttgcaaatcatttagcagaatataaaaaa
ggtgtatcagttaaactttttataggtggtactgatattgagaaagatcgtcaacgtgct
aaaaatcaaccacagcttgttatcggaacgccaacacggataaatgatttagccaaacat
ggcgatttgcatgtccatttggcatcttatttagtagttgatgaagctgacttaatgatt
gatttaggattaatagacgaagtagatcacattgctacaagattagatgacgggtctcat
ttagcagtatttagtgctactatccctaagtcactgcatccatttttaaataaatattta
gaaaaccctgactatgtagaaattgaaagcacacaaaaaaataaaaagaatatcgaattc
tatttgatccctacgaaaggtgaagcaaaaatagaaaaaacaattaaattaatcgatatc
ttaaatccgtatttatgtattatattttgcaatagtcgcgatagcgctgatgaacttgct
gatcaattaaacactgctggactgaaattaggtatgatacatggtggcttaacacctaga
gaacgtaaacaacaaatgaaacgtatccgaaacttagaatttcaatatgtgattgcaagt
gatttagcttcccgtggtatagatattgaaggtgtgagtcatgtcattaattttgatgta
ccgaacgacattgatttctttacacatcgagttggccgtacaggtcgtggccaatataaa
ggggttgctattacactatatagtcctgaagaagaagaaaacatagcattaatagagcaa
cgtggttatcatttcgaaaacgttgatattaaaaatgatgaaataaaatcgattaaagca
cacaatacacgccaatcgcgtaaaaacaaagatgatcatttaactaatgaattgaaatat
aaagtaaaaagaaacaagaaaaaggttaaacctggttataagaaaaaattccaacgtgat
ttagaacatttaaaacgtcaagaacgtaaaaaatttagcaaaaagcaaaatcgtcaagcc
agaaaaaaataa
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