Streptomyces niveus: BBN63_03595
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Entry
BBN63_03595 CDS
T04887
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
snw
Streptomyces niveus
Pathway
snw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
snw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBN63_03595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snw03400
]
BBN63_03595
Enzymes [BR:
snw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BBN63_03595
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BBN63_03595
DNA repair and recombination proteins [BR:
snw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBN63_03595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
zf-TFIIB
Ribosomal_S13
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AQU65465
UniProt:
A0A1U9QP80
LinkDB
All DBs
Position
complement(851591..852457)
Genome browser
AA seq
288 aa
AA seq
DB search
MPEVPEVEALREFLDGHLVGKEVARVLPLSINVLKTYDPPLTALEGATVSGIERHGKWLD
IVAGDSGLHLVIHLARAGWLRWKDEFPATPPRPGKGPLALRTVLTGGDGFDLTEAGTTKR
LAVHLVRCPFEVPAVASLGPDPLDESFDRDALAALLAGERRQLKGALRDQRLIAGIGNAY
SDEILHAAKMSPFKPVQNLTDDEITVLHDAMRTTLNSAIERSRGVAAGRLKAEKKSGLRV
HGRAGETCPVCGDTIRSVAFADSSLQYCPTCQTGGKPLADRRTSRFLK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgccggaagtccccgaagtcgaagcgctgagagagttcctcgacggccatctggtcggc
aaggaggtagcccgcgtcctgcccctgtcgatcaacgtcctcaagacgtacgacccgccg
ctcaccgccctggagggcgccaccgtcagcggcatcgagcggcacggcaagtggctcgac
atcgtggcgggcgactccgggctccatctcgtgatccatctggcccgcgcgggctggctg
cgctggaaggacgagttccccgccaccccgccgcgcccgggaaaggggccactggcgctg
cggaccgtcctgaccgggggcgacggcttcgacctgaccgaggcgggcaccaccaagcgc
ctcgccgtccatctcgtacgctgccccttcgaggtgcccgccgtcgcgagcctgggcccc
gacccgctggacgagtccttcgaccgcgacgccctcgccgcgctgctcgcgggggaacgg
cgccagctcaagggcgccctgcgggaccagcggctgatcgcgggcatcggcaacgcgtac
agcgacgagatcctgcacgcggcgaagatgtcacccttcaagccggtccagaatctgacc
gacgacgagatcaccgtcctccacgacgcgatgcgcacgacgctgaactcggcgatcgag
cgctcgcgaggcgtcgccgcgggccggctcaaggccgagaagaagagcggtctgcgggtg
cacggccgggccggcgagacctgccccgtctgcggcgacaccatcaggtcggtcgccttc
gcggactcctcgctccagtactgcccgacctgccagacgggcggcaaaccgctcgccgac
cgccggacgtcccgcttcctcaagtag
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