Streptomyces nigra: DC008_20270
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Entry
DC008_20270 CDS
T05839
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
snz
Streptomyces nigra
Pathway
snz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DC008_20270 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snz03019
]
DC008_20270 (recQ)
03400 DNA repair and recombination proteins [BR:
snz03400
]
DC008_20270 (recQ)
Enzymes [BR:
snz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DC008_20270 (recQ)
Messenger RNA biogenesis [BR:
snz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DC008_20270 (recQ)
DNA repair and recombination proteins [BR:
snz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DC008_20270 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
AWE51796
UniProt:
A0A2S1IGS3
LinkDB
All DBs
Position
4356747..4358780
Genome browser
AA seq
677 aa
AA seq
DB search
MGATGVISEMPAVTEADRTGDSEALAALHRVFGYDSFRGEQEAVIDHVVAGGDAVVLMPT
GGGKSLCYQIPSLVRPGTGVVVSPLIALMQDQVDALRALGVRAGFINSTQDFDERRVMEA
QYAAGELDLLYLAPERLRLDATLDLLSRGKISVFAIDEAHCVSQWGHDFRPDYLSLSLLG
ERWPDVPRIALTATATRATHQEITQRLGMPDARHFVASFDRPNIQYRIVPKADPKKQLLS
FLREEHSGDAGIVYCLSRKSVEATAEFLSRNGIEAVPYHAGLDAATRAAHQSRFLREEGL
VVVATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWMAYGLNDVIQQ
RKMIQLGEGDEAFRRRAAAHLDSMLALCETVQCRRGQLLAYFGQDPEAGACGNCDTCLTP
PETWDGTVAAQKVLSTIVRLQRERGQKFGALQIVDILLGRRTAKVIQFDHDQLSVFGIGE
ELTEGEWRGVIRQLLAQGLLAVEGEYGTLVLTEASGSVLRREREVPLRKEPKKPASTRSG
SGSGRGDRKAKSPAAELPQELVPAFEALRAWRAEQAKEQGVPAYVIFHDATLREIATVWP
TSVAELGGISGVGEKKRATYGEGVVEVLAGLTAPGATEAAPQSASDSASDSAPRSVDRPA
ADDFDWAQEEPEPDGWE
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgacgggcgtgatcagcgagatgccagcggtgaccgaggcggaccggacaggc
gacagcgaggcgctggcggcgctccaccgcgtcttcggatacgactccttccggggtgag
caggaagccgtcatcgaccatgtcgtggccggcggcgacgcggtcgtgctcatgccgacc
ggcggcggcaagtccctctgctaccagatcccctccctggtcagaccgggcacgggcgtg
gtcgtctccccgctgatcgccctcatgcaggaccaggtggacgcgctgcgggcgctcggc
gtgcgcgccgggttcatcaactccacacaggacttcgacgagcgccgggtcatggaggcg
cagtacgcggcgggggagctggacctgctctacctggcccccgagcgtctgcggctcgac
gcgacgctggatctgctctcccggggcaagatctcggtgttcgccatcgacgaggcgcac
tgcgtctcgcagtggggccatgacttccgccccgactacctctccctgtccctgctgggc
gagcgctggccggacgtgccccggatcgccctgacggcgaccgccacccgggccacccac
caggagatcacccagcggctgggcatgccggacgcccggcacttcgtcgccagcttcgac
cggcccaacatccagtaccggatcgtgccgaaggccgacccgaagaagcagctgctgagc
ttcctgcgcgaggagcactccggcgacgcgggcatcgtgtactgcctgtcccggaagtcg
gtcgaggcgaccgccgagttcctctcacgcaacggcatcgaggcggtcccgtaccacgcg
ggcctcgacgcggcgacgcgcgcggcccaccagtcccggttcctgcgcgaggagggcctg
gtcgtggtggcgaccatcgccttcggcatgggcatcgacaagccggacgtacggttcgtc
gcccacctcgacctgcccaagtccgtcgagggctactaccaggagaccggccgcgccggg
cgtgacggcctgccctccacggcctggatggcctacggcctcaacgacgtcatccagcag
cgcaagatgatccagctgggcgagggcgacgaggcgttccggcgccgggcggccgcccac
ctcgactccatgctggcgctgtgcgagacggtccagtgccggcgcggccagctgctcgcc
tacttcggccaggaccccgaggcgggcgcctgcgggaactgcgacacctgtctgacgcca
cccgagacctgggacggcaccgtggccgcgcagaaggtgctgtcgacgatcgtgcgactg
cagcgcgagcgggggcagaagttcggcgcgctgcagatcgtcgacatcctgctggggcgg
cgcaccgccaaggtgatccagttcgaccacgaccagctctccgtgttcggcatcggcgag
gagctgaccgagggcgagtggcggggcgtcatccgccagctgctggcccagggcttgctc
gccgtcgagggcgagtacggcacgctcgtgctgacggaggccagcggctcggtgctgcgg
cgggagcgggaggtgccgctgcgcaaggagccgaagaaaccggcgtccacgcggtcgggc
tccggttccggacgtggcgaccgcaaggccaagagccccgccgccgagctgccgcaggag
ctggtgccggccttcgaggccctgcgcgcctggcgcgccgaacaggcgaaggaacagggc
gtcccggcgtacgtcatcttccacgacgccacgctgcgcgagatcgccacggtgtggccc
acctcggtggccgagctgggcgggatcagcggcgtcggcgagaagaagcgggcgacgtac
ggggaaggggtggtcgaggtgctggcggggctgacggcgcctggagccaccgaggccgct
ccgcagtccgcttcggattccgcatcggactccgcaccgcggtccgtggaccggcccgcg
gcggacgacttcgactgggcgcaggaggagccggagcccgacggctgggagtga
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