Streptomyces nigra: DC008_28495 Help Entry DC008_28495       CDS       T05839                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism snz  Streptomyces nigra Pathway snz03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:snz00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     DC008_28495  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:snz03400]     DC008_28495 Enzymes [BR:snz01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      DC008_28495 DNA repair and recombination proteins [BR:snz03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      DC008_28495 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol DNA_primase_S Motif Other DBs NCBI-ProteinID:  AWE53236 UniProt:  A0A2S1IKU9 LinkDB All DBs Position 6181835..6182770 Genome browser AA seq 311 aa AA seqDB search MSDGDGATTVRAGRRTVEVKRVDKVLFPGGGGAKEYTKGDLIEYHRAVAPYMLPHLRGRP LMLERHPDGVDGPTFMQKNTPEHYPDWITRVEVPKEDGTVTHTVCDDTATLVFLADQACL TLHRWLSRTDTAGGVNHPDRLVFDLDPPGDDFEQVRAAAHALHGLLDELELPSAPMTTGS RGLHVVVPLDGRDDFDTVRDFAHEVAEALVAAHPDRLTTAARKKDRGDRLYLDVQRNAYA QTAVAPYTVRARPGAPVATPVAWDAVDDPELHARRWTIADAVEQAATEPWAELGRARALG PARRRLATLRD NT seq 936 nt NT seq  +upstreamnt  +downstreamnt gtgagcgacggtgacggcgcgacgacggtgcgggcgggccgccgcaccgtcgaggtcaag cgcgtcgacaaggtgctcttccccggcggcgggggagcgaaggagtacaccaagggcgat ctgatcgagtaccaccgggccgtcgccccgtacatgctgccgcatctgcggggccgtccc ctgatgctggaacggcaccccgacggcgtcgacggccccacgttcatgcagaagaacacg ccggagcactacccggactggatcacccgcgtcgaggtgcccaaggaggacggcacggtc acgcacaccgtctgcgacgacacggccaccctcgtgttcctcgccgaccaggcgtgtctg accctgcaccgctggctgtcgcggaccgacaccgcgggcggcgtgaaccacccggaccgg ctcgtgttcgacctcgacccgcccggcgacgacttcgaacaggtccgggccgccgcccac gcgctgcacgggctcctggacgaactggagctcccgtcggcgcccatgacgaccggctcc cgcggactgcacgtcgtcgtcccgctcgacggccgggacgacttcgacaccgtccgggac ttcgcgcacgaggtcgccgaggcgctcgtcgcggcccatccggaccggctgaccacagcc gcccgcaagaaggaccgcggcgaccgcctctacctggacgtccagcgcaacgcctacgcg cagaccgccgtcgccccctacaccgtccgcgcccggcccggcgcccccgtcgccaccccc gtggcctgggacgccgtcgacgacccggagctgcacgcccgccgctggaccatcgccgac gccgtcgagcaggccgccaccgagccctgggcggagctcggccgcgcccgcgccctcggc ccggcccgccgccggctcgcgaccctgcgtgactga

DBGET integrated database retrieval system