Solenopsis invicta (red fire ant): 105194237
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Entry
105194237 CDS
T03916
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105194237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soc03041
]
105194237
Enzymes [BR:
soc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105194237
Spliceosome [BR:
soc03041
]
Complex A
U2 snRNP components
U2 related factors
105194237
Complex B
105194237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
105194237
NCBI-ProteinID:
XP_011157372
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MVRSSDKDRHHRRRSRSRSRSRSGEPDKKRRRSRSRERERDRDKGRHRERRSRSRDRERE
RSDRRERSERDKDRERKRGDSKEKRLTGSKSSRSGKERSNRSRSRDRKDKEKGDNEELPF
DHTKLDKEEEQKRLELEMQKRRERIERWRAERKKKELEATKKDGKTSILANLQLPMKKWS
LEDDSDEETPVVQNNKEAKEEGVKEEIEELKEEVKDEEEEIDPLDAFMAEVQEEVRKVNK
VDGKAPKNANNGSNSASQSGGVVIMTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGENLH
ETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTPEEVEVYKEELEGIRVKG
KGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTL
AFLLPMFRHILDQPPLADGDGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTG
ISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVM
RIMENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSVVCKDVEQHVVVLEEDQ
KFYKLLEILGHYQDKGSTIIFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILD
FKAGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFIT
SEQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKKVHTGGGFSGKGFKFDESE
AALANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIAKPTATSITVPGQP
IPSATDKLELARRLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVAEQLAA
KLNTKLNYQPREEDLVESDVETGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYS
EAGLTVRGTYIAPGKTPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQASGAH
TASRGRYKVL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaagtagcgacaaggacagacatcatcggcggagatcaagatcgcgatcgaga
tcgagatcgggcgaacccgataagaaacgacgacgttccagaagtagggaacgagaaagg
gacagagacaagggacgacatcgagagcggaggagtcgttcgcgagacagagaaagggaa
aggagcgacaggagagagcgttccgagagggacaaggatcgcgaaagaaaacgtggagac
agtaaagaaaagcgtcttacaggctcgaaatcctcgcgctctggcaaagaacgatcaaac
aggtctcgttcgcgtgatcgaaaggataaagaaaagggggacaatgaggaattacctttt
gatcacacaaagttagacaaggaggaagagcagaaaagactggaattggaaatgcaaaag
agaagggagaggatagaacgatggcgtgcagaaaggaagaagaaagaacttgaagcgacc
aaaaaagacggtaagacatctattttggcaaatcttcagctacccatgaaaaagtggtcc
cttgaggatgatagtgatgaagagactcctgtggtacagaataacaaagaggcaaaagaa
gaaggtgtaaaggaagaaattgaggaattgaaggaagaggtaaaagatgaagaggaggag
attgatccacttgacgctttcatggcagaggttcaagaagaagttagaaaagtgaataaa
gttgatggcaaagctccgaaaaatgccaacaatggctctaattctgcatcgcagagtggt
ggtgttgtcattatgactggagtagctaagaaaaaagtacagaaacagaaaggagaattg
attgaacaaaatcaagatggattggagtattcgagcgaagaagaaggtgagaatcttcac
gagaccgcggctggcatagcaaacaaacagaagagagaattagctaaagttgatcatgct
acaacagagtatcaaccattccgaaagtctttttacgtcgaagtgcctgagattgcaaga
atgacaccagaagaagtggaagtatacaaggaagaattggaaggtattcgcgtgaaaggt
aaaggttgtcctaagcccatcaaatcctgggcacaatgtggcgtgaccaaaaaagaatta
gaagtattaaagaaacttggttatgagaaaccgacgcccattcagtgccaggcaattccg
gcaatcatgtccggtcgtgatctgataggtatagcaaaaaccggtagcggaaaaacgtta
gcttttttgttaccgatgtttcgtcacatactcgatcaaccaccgttggccgatggtgac
ggaccaatcgcgttgattatgactccgactagagaattgtgcatgcaaatcggcagggat
tcgaaaaaatttacaaaatcgttgggtctttcgcacgtgtgcgtttatggcggaactggc
atttctgagcaaatagcagagcttaagagaggagctgaaatcatcgtatgcacaccggga
aggatgatcgacatgcttgctgctaacagcggacgagtgaccaatttacgtcgagtaacg
tatgtagtgcttgatgaggccgacaggatgtttgacatgggttttgagccgcaggtgatg
cgtattatggagaatgtaagaccggatagacagacggtgctatttagcgcgacgttcccg
cgacaaatggaggcgctggctagaagaatactaacgagaccggtcgaggtacaggtcggt
ggacgttctgtcgtttgcaaggatgtggaacaacatgtggttgtactcgaggaggaccag
aaattctacaagttgcttgaaattcttgggcattatcaagacaaaggctccactattata
ttcgtagacaagcaagagaacgcagatacgttgctcaaagatctcatgaaggcttcgtat
tcctgcatgtctcttcacggtggtatagatcaatgcgatcgagattcaactatattggac
ttcaaagcaggacgaacaaaattgctcgtagccacatccgtcgccgctagaggtttggat
gtcaagcacttggtattggtcgttaattacgattgccctaatcactatgaggattacgta
catagatgtggtagaactggtcgagccggaaataaagggtatgcgtacacttttattaca
tcggaacaagaacgttacgccggcgatattttacgtgcgcatgagttagccggtgtaccc
gtcccagaacctttacgtcaattatgggaaggttacaaagcccgtcaagccgcggatgga
aagaaagttcataccggaggtggattcagtggcaaaggattcaaattcgacgaatcggaa
gccgcattagcgaacgagaaaaagaaattccagaaggcggccttaggtttgcaagattcc
gacgacgaggatatagaaaacgatattgatcaacagatcgagagtatgctggcacctaag
cgaacagttcgtgaaatagccaaaccgactgcgaccagtattaccgtgcccggtcagccg
ataccaagtgccaccgataagttggaattggccagaagattggcgtcaaagataaatatt
gcgaagaatctgggtgccgaggcgaaaggcgctactcaacaagcagcagaagccatactc
aagggtgcaggacctacgaatcttattacggcaaagacagttgcggaacaactggcggcg
aagctgaatactaaattgaattatcagccgcgcgaggaagatctcgtggaaagcgatgtg
gaaacgggcgagcagacattccgcaaatatgaagaagagcttgagatcaacgacttccca
caacaagcgagatggcgagtcacgagcaaggaggctcttgctcagatctcggaatattct
gaggcgggtctgacagtgagaggaacgtatatcgcgcctggtaaaacgccaccggaaggc
gagagaaagttatacttggcaatagagtcgacgagcgagttagcggttagcaaagccaaa
gcggaagtgtcccggctcatcaaagaggaacttattaaactacaagcgtctggcgctcat
acggcgtcgcgaggtcgatacaaagttttataa
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