Solenopsis invicta (red fire ant): 105195101
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Entry
105195101 CDS
T03916
Name
(RefSeq) terminal nucleotidyltransferase 4B
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105195101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105195101
03016 Transfer RNA biogenesis [BR:
soc03016
]
105195101
Enzymes [BR:
soc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
105195101
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
105195101
Transfer RNA biogenesis [BR:
soc03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
105195101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
Motif
Other DBs
NCBI-GeneID:
105195101
NCBI-ProteinID:
XP_039305916
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Position
5:complement(20470506..20476666)
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AA seq
652 aa
AA seq
DB search
MDPTIGWYQPEQYGPAKDLWLHIWEAEKGLDVLTLRNDANTSNAMGVRLQQDGRTTTTTT
AAAAATAATIAAGIMPLSNANTGTSGNGNGSGNGGNASSSSSTSSSNNNSNSSNNSNGSN
GRAASAVHGTAAGNGNGEHRVPLNAGNFYYNPSRRKGDNRASTYGMNYNYDALVGEYGGC
PWRVPDKHYSKGVIGLHEEIEDFFAYMCPSHEEHVLRLTVVKRIESVIYDLWPDSKVEVF
GSFRTGLYLPTSDIDLVVIGMWTNLPLRTLERALLDQNIAEPSSIKVLDKASVPIVKLTD
KESEIKVDISFNMNNGVKSAELINSFKKQYPVLEKLVMVLKQFLLQRDLNEVFTGGISSY
SLILMTISFLQLHPRKDIHCPNTNLGVLLIEFLELYGRKFNYVKTGIRVKDGGLYISKEE
IQRDMIDGHRPSLLCIEDPLTPGNDIGRSSYGALYVKSAFNWAYCILSQAANPSNILIND
ASKVSILGRIIRVTDEVIEYRKWIKDTFLLPISEGDSLSSSTGSDASTLSAPASDTDSEC
SRGNSPNTGGKNENDKNKDRHFYNSHQIHSYSGRKAFKTTTHASHQQSFKGSYNRINNNI
VGQNKTKHALHSNGNNNNNNNNNTSHSPSSRPNSMKRKKQCTMQRGTGDCVR
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaccatcggttggtaccaaccggagcagtacggccccgccaaggacctttgg
ttgcatatctgggaggctgagaagggcctcgacgtcctcaccctgcgtaacgacgcgaac
acgagtaacgcgatgggcgtgcggctgcaacaagacgggcggaccacgacgacgacgacg
gcggcggcggcagcgactgcggcgacgatcgcggccggcatcatgccgttatccaacgcc
aacaccggcaccagcggcaacggcaacggcagtggtaacggcggtaatgccagcagtagt
agcagcaccagcagtagcaacaacaatagcaatagcagcaacaatagcaacggtagcaac
ggccgggccgcgtccgctgttcacggcactgccgccggcaacggaaacggcgagcaccgc
gtgcccctcaacgccggcaacttctattacaatccgtcccgcaggaaaggcgacaatcgg
gcgagcacctacggcatgaattacaattacgatgctcttgtgggcgagtacggcggctgt
ccttggcgcgtgccggacaaacactactccaagggggtgataggattacacgaggaaata
gaagatttttttgcatacatgtgcccctcgcacgaagagcatgtattaagattgacagtt
gtaaaaagaatagaaagtgtaatttatgatctctggccagattcgaaagttgaagtattt
ggtagctttcgcactggtttatatttgcctacgagtgatatagatttggtagtaatagga
atgtggacaaatcttccattgcgtactttggaacgtgctttgctagatcaaaatattgct
gagccatcatctataaaagtgttggacaaggccagtgtaccgattgtcaaactgactgat
aaggagagtgagattaaagtggacattagtttcaacatgaacaatggtgtcaaatctgcc
gagttaataaattcttttaagaagcaatatccagttctggagaagctagtcatggtgttg
aagcagtttctattgcaaagagatcttaacgaagtgttcaccggtggtatatcctcatac
agtttaatactcatgactatcagttttttacaattacatccgagaaaggatattcattgt
ccaaacaccaacctgggagtattgttaattgaatttctagagctatatggtagaaagttc
aactatgttaagactggcatacgcgtaaaggatggtggtctttatatatctaaagaggag
attcaacgagatatgatagatggtcatcgaccatccctgttgtgtatagaagatccgctc
acacccggaaacgatatcggccgtagtagttacggtgctttgtatgtaaagagtgcattt
aattgggcctattgtattctctctcaagcggccaatccctcaaatatcttaatcaatgac
gccagtaaagtaagcatactgggaagaataatccgcgtgactgatgaagtaatagaatat
cgtaaatggattaaagacacattcctcttacccataagcgaaggagattctctgtcaagt
tcaactggttctgatgcgtccactctttcagctcccgccagtgatacggactccgagtgt
agtcgtggcaattctccaaacactggtgggaagaatgaaaacgacaaaaacaaagatagg
cacttttataatagtcaccaaatccacagttattctggaagaaaagcattcaaaacaacc
actcacgccagtcaccaacagagcttcaaaggcagctataatcgcatcaacaacaatata
gttggtcagaacaagaccaagcacgcactccacagtaatggaaacaacaacaacaataat
aataacaatactagtcacagtccaagctctaggccaaactcgatgaagaggaagaagcag
tgtacgatgcaacgtggaaccggagattgtgtacggtga
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