Solenopsis invicta (red fire ant): 105196856
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Entry
105196856 CDS
T03916
Name
(RefSeq) THO complex subunit 1 isoform X3
KO
K12878
THO complex subunit 1
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03013
Nucleocytoplasmic transport
soc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105196856
09122 Translation
03013 Nucleocytoplasmic transport
105196856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105196856
03041 Spliceosome [BR:
soc03041
]
105196856
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105196856
Spliceosome [BR:
soc03041
]
Complex C
Other components
EJC/TREX
105196856
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105196856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
GNAT_acetyltr_2
Carbpep_Y_N
Motif
Other DBs
NCBI-GeneID:
105196856
NCBI-ProteinID:
XP_011161293
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All DBs
Position
6:complement(9359373..9363340)
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AA seq
653 aa
AA seq
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MAMFEALRKDYSDYLQQHFKLSDVSLFQKKCIERYANESDRKAAVDQALRDTLLVVLMEN
ASGNVRSLETYITFCIELCRKDLATASMPVMLLGDIFDSMTLDRCEQLFTFVENNVNVWK
EELFFTACKNNLLRMCNDLLRRLSRSQQTVFCGRILLFLAKFFPFSERSGLNIVSEFNLE
NHTEFGVEKAEEDDLEQITKDDDKLESKIPIDYNLYRKFWALQDFFRNPNQCYNKMHWKV
FSAHASNVLSAFASFKLEEQRSYPTTCMKMDTSTEGSHKETHYFAKYLTNQKLLELQLSD
SNFRRYVLLQFLILFQYLNSTVKFKAETHELKPDQVEWVKTTTEQVYTLLTETPPDGPMF
AETVKNILKREEHWNAWKNEGCPPFKRPASEVGGDEPRKIRKPKRRIGDMIKDAQAIGKY
HMGNPELTKLWNLCPNNLEACKSKDRDFLPSLETYFEDAIMELDPAAMVDDKYKKVNDGN
FGWRALRLLARRSPHFFVHGNNPINKLPEYLEAMIKKIAKDRPQTQSDTKLETEETPPSE
STDQEFNEDVLKQESEQVDAENADMKARKLNKVTPEMVAKLSESLKNDWKKLATKFGYTN
DEIAFFQSKATPYEQCKTMLEIWAEEDEDASVENLAYILEGLKYTEALTILKS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtttgaagcattgaggaaggattacagtgattatctgcagcagcatttcaag
ctgtcagatgtctcgttgtttcaaaaaaagtgcattgaacgttatgcaaatgagagcgac
agaaaagcagcagttgatcaggcacttcgagatactctgctggttgtactgatggaaaat
gcatcgggtaatgtgcgttctcttgaaacctacatcaccttctgtatagagctatgcagg
aaggatctcgcaacggcgagcatgccagtgatgctactaggtgatatcttcgactcaatg
acactggatagatgcgaacagttatttacttttgtggaaaacaatgtcaatgtgtggaaa
gaagagctgttttttactgcttgtaaaaataatttgttgagaatgtgcaacgacctgcta
aggagattatcacgttcgcagcaaactgtattttgtggtagaattctgctgttccttgca
aagttctttcccttctccgagaggtctggtttgaatattgtcagtgaatttaatctggaa
aatcacacggaatttggcgttgaaaaagcagaggaggatgatttagagcagataactaaa
gatgatgataaattggaaagcaagataccaattgattataatttatatagaaagttctgg
gctctgcaagattttttcagaaatccaaatcagtgttataataaaatgcactggaaggtt
ttttcagctcatgcatctaatgtgctgtcagcgtttgcttcttttaaattggaagagcaa
cgtagttatcctacgacatgcatgaagatggatacttccacagaaggttcccacaaggaa
acgcactattttgcaaaatatttgaccaatcaaaaattattagagttgcagctatcagac
tccaatttcagacgatatgtattgctgcaatttctcattcttttccagtatctgaatagc
actgtaaaattcaaggctgagacacacgagctcaagccagaccaagttgagtgggtgaag
actactaccgaacaagtttatactctactgactgaaacaccacctgatggtccaatgttc
gcggagacagtgaaaaacatcctgaaacgcgaggagcattggaatgcatggaaaaacgag
ggttgcccgccatttaaacgaccggcatcagaggttggtggtgacgagccgcgaaaaata
aggaagccaaaacgacgtattggtgacatgattaaagatgcgcaagcgattggcaaatat
cacatgggaaatccagaactaactaaattatggaacctatgtccaaacaatctggaggca
tgcaaatctaaagatagagattttctcccatctttagaaacatattttgaagacgctata
atggaattggatcctgctgcaatggtcgatgataagtacaagaaggttaacgatggtaac
tttggttggagggcgctaaggttgttagcaaggcgaagcccacacttttttgttcacggc
aataatcctataaataaattgcctgaatatctcgaggcaatgataaaaaaaattgccaag
gatcgtccacagacacagtctgatacaaaattggaaaccgaagagacaccaccatctgaa
tctaccgatcaagaatttaacgaggacgttttgaagcaggaaagtgagcaggtagatgcc
gaaaacgctgacatgaaagctagaaagttgaataaagttacaccagaaatggtggcaaaa
ttatcggagagtttgaaaaatgattggaaaaaattagcgacgaaatttggttatacaaat
gatgagattgcgtttttccaaagcaaagcaactccatatgagcaatgtaagactatgctt
gaaatatgggcggaagaggacgaggatgcatctgtcgagaatttagcttatattttagaa
ggtttaaagtacacagaggcattaacgatactaaaatcttaa
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