Solenopsis invicta (red fire ant): 105198553
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Entry
105198553 CDS
T03916
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71 isoform X2
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105198553
04121 Ubiquitin system [BR:
soc04121
]
105198553
Enzymes [BR:
soc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105198553
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105198553
Ubiquitin system [BR:
soc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105198553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
DUF5128
Motif
Other DBs
NCBI-GeneID:
105198553
NCBI-ProteinID:
XP_011163597
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All DBs
Position
5:15402764..15416180
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AA seq
894 aa
AA seq
DB search
MNQLKSPRNRIDYNRHSMQLTNKSRKQDDQHFTPRKFTNSKKGRSYPDSSPDHFLKQFPP
GKLSQQEFKDNALNRSILNRDSLNEYPKLHSQSSMLGSSLSCSSESRSCSSDDNLTTYSP
VHQLDGSPDDHFEYFRMFEDASGTDVPGPNFSAASYRNESCQPNYETFEDLNMNLLKFDL
LDDISRRQSPAREECSPSVEGDVINESFVTLMTKELEKDESDINILSREQRTRSPSSQRD
SSDFPLISELEVANEIKNENSGQQSPANERWSQNLNMEEDTSSAITTVNKEEAKDTIEDR
SLDQTMKIMASPYECNDHPCAQMSYCQTCCKIICKECATQCVCKHVTVDLVEFLDITQRQ
AEEVLMEAYLGVDVLADDMESMGLDIAALDQRTREALTDVKFFSRRLWSAVEEREKKLFK
QIVETRRWKYEVLHEKYMNLKEDKTRLSQAINALKCAIHDAQSSSACNPDDLLQRKDMVL
AEIWQIRQSRKTKIRSVRDDNWISFRNPDNNVLSVIANGGNILVNGPGTIGDRLPNRDYK
ISQSYFPYGISEHMMQSIPRGRPIVNYDRSVCLPNRLPELQVKSTDVTILGYFGENNPDN
LCRPWGLTCDHEGNIIISDRSNNRIQIYREDGTLIRKFGCYGNGPCQFNRPAGIAVDARR
RLIVVDKDNHRVQILTTEGEFLRSFGEHGEKQGQFCYPWDVAVNSVCEIAVTDTRNHRVQ
LFSPEGIPLRMFGGQAHQLRYLDSPRGICFNPEGKLVVTDFNNHHVLIIEYNMTESRILK
CEKESKCRRQDGENNDGQNDENTPTFQRPQGVIAADDGSILVADSRHNSIKAFNSLGSLL
YSYKPGQEEMDRPLGIALHWDGRMTFTDYGRNYVRLVKLENHVNPMPRNNIMFG
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaattaaaatctccccgcaacagaatagattacaaccgccattctatgcaactt
acaaataagtctcggaagcaagatgatcaacattttactccgagaaagtttaccaactcc
aaaaaaggccgttcgtatccggactccagtccagatcactttctaaagcagtttcctcca
ggaaaattgtcgcaacaggaattcaaggacaacgcattaaatcgttcgatcctcaatcga
gattccttgaacgaatatccgaaactgcacagccaaagttccatgcttggcagttcccta
agctgctcgagtgagagtcgttcgtgctcttcagatgacaatctaacgacctattcgcca
gttcaccagctggacggatcaccagacgaccatttcgagtattttcgaatgtttgaagat
gccagcggaactgatgtacccggcccgaatttctcggccgctagttaccgtaacgagagc
tgccagccgaactatgagacgttcgaagatctcaatatgaatcttctgaaatttgatttg
ctggacgatatctccaggcgacaatcgcccgcacgtgaggaatgcagcccgagtgttgag
ggagatgtgatcaacgagtcattcgtaactttgatgacgaaagagttagagaaagacgag
agtgatataaatatactatcacgagagcagcgaactcgtagcccgagcagtcagagagac
tcatccgattttcctttgatatcggagttggaggtggcgaatgaaataaagaacgaaaat
tcaggacagcagtcacctgcgaacgaacgatggagccagaacttaaacatggaggaggat
acgtccagcgcgattacgacggtcaacaaggaagaggcgaaggatactatcgaggatcga
tcgctcgatcagaccatgaaaatcatggcatcgccgtacgagtgcaacgatcatccgtgc
gcgcagatgtcctactgtcagacttgctgcaaaatcatctgcaaggaatgcgccactcaa
tgcgtttgtaagcacgtgacggtggatcttgtagagtttctcgacatcacccagcgtcag
gctgaagaggtgctgatggaggcctatcttggagtcgacgttcttgcagatgatatggaa
agtatggggttggacattgcagcgttagatcagagaaccagggaggcgctcactgacgtg
aagtttttttcacgaagactgtggtccgcggtggaggagagggagaagaaattgtttaaa
caaattgtggaaacgcgccgatggaagtatgaagtgcttcatgagaagtacatgaattta
aaggaggataagacaaggctttcccaagccattaatgctctcaaatgcgcgatccatgac
gcgcaatcatcctctgcgtgcaatcctgatgaccttttgcagagaaaagatatggtgttg
gctgagatctggcagattcgtcagagtcggaagacaaaaattcgatctgtccgagacgac
aattggatctctttcaggaatcccgataacaacgtgctgtccgtgatcgctaacggagga
aatattttagtgaacggtccaggtacgatcggggaccgtctaccaaatcgcgattacaaa
atatcgcaatcgtactttccgtacggaataagcgagcatatgatgcaatcgattccgcgc
ggtcgtccgatagtaaactacgatcgcagtgtctgcctccctaaccgattaccggagttg
caagtcaagagcacggatgtcacaattcttggctactttggcgagaataatcccgacaat
ctctgccgtccgtggggactgacttgcgaccatgagggcaacatcataatcagcgatcga
tctaacaatcgtatacagatttatcgcgaggacggcacgctgatcaggaaatttggatgc
tacggaaatggcccttgtcaattcaatcgtccagccggaatcgccgtcgacgccagacgt
cgccttattgtggtcgacaaggataatcatcgcgttcagattctgactacggagggcgaa
tttttgaggtcctttggcgagcacggcgaaaaacagggccaattttgttatccttgggac
gtagcggtaaattcagtttgcgaaatcgcggttacagatacgaggaatcaccgtgtacag
ctattcagtcctgagggtattcctctacgtatgttcggtggtcaagctcatcaattgaga
tatctagattcgccgcgcggtatctgcttcaatcctgagggcaagcttgtcgtcacggac
tttaacaatcaccatgttctgataattgaatataacatgacggaaagtcgcatacttaaa
tgcgagaaggaatcgaaatgcaggaggcaggacggggaaaataacgacgggcagaacgat
gaaaacactcccacgtttcagagaccccagggcgttatagcggccgacgacggtagtatt
ctagtcgctgattcccgccacaattcgatcaaggcgtttaactccctcggttcgttactc
tattcttacaagcccggtcaagaggaaatggaccgtccattgggtatagctcttcattgg
gacggaagaatgacatttacggattatggtcgtaattacgtgcgcctagtaaaattggaa
aatcacgtgaatccgatgccgaggaacaatatcatgttcggttga
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