Solenopsis invicta (red fire ant): 105198713
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Entry
105198713 CDS
T03916
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03013
Nucleocytoplasmic transport
soc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105198713
03015 mRNA surveillance pathway
105198713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105198713
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105198713
mRNA cycle factors
P-body specific factors
105198713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
105198713
NCBI-ProteinID:
XP_039306259
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Position
1:32699529..32706487
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AA seq
605 aa
AA seq
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MTEEAQQSESTAQNDSCSVQNDTQTNSSEVGKTKDNKKEKCRPITKVVIRRLPPTMTQDQ
FLEQVSPLPEHDYMYFVKADMSLGQFAFSRAYINFMEQQDIFMFREKFDNYVFVDSKGVE
YPAVVEFAPFQRLPKKRAGKKKDLKCGTIESDSYYISFLENLKNQEIDSSVAQSKTEYSY
QPPDNTVKKIMTTPLLEYLKLRKQEKQRLRDEKREERRRRDMERRRTKDDPVISKVLRNP
DLDKESSKDDKENKEERDKLSPKELKNRNKKDDKIREKPMRDREIKPIIKGYRERIDDRN
KEREVKQRRYDEKKPYGRRDDREERRIDLRDDRRYEIKEEFRESRDRKVEERRGKSYEKM
RQEKKKLAETKKQIADANGDDTNSKKAKEEHDILQERENENGKESIYNGDDLRHAKDNEC
EQRNTAEDRVTGTDAIQNCRDSLEEGKDSVNADANDEDDSKDKESKVVKRRNSLESGGEG
GAGDGNCLRRHKSLDGGGQSNLQKNDNEEKEKDKKDPRLERRIRNKDRPAMEIYRPGMGK
FSKQRLEREKSSDERASLSQSPTPNPSASSTTGKSGKVGATEIYIDDALTSAYSRFVMYN
FPCTV
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagaagcgcaacaatccgagagtactgcgcaaaacgacagctgttcggtgcag
aacgacacgcagaccaattcgtcggaagtcggaaaaactaaggataataaaaaagaaaaa
tgtcgtcccataacgaaggtggtgatcagaagactgcctccaacaatgactcaggatcaa
ttcttagaacaagtctctccattaccggaacatgactatatgtactttgtgaaggctgac
atgtctctcgggcagttcgcattttctcgagcttatattaatttcatggagcagcaagac
attttcatgtttcgagagaagtttgacaactacgtcttcgtagattctaaaggagtggaa
tatcccgcagtagtggaatttgcgccttttcaaagattaccaaagaaacgagcaggcaag
aagaaagatctcaaatgtggcaccatcgagagtgactcgtattacataagcttcttagag
aatttaaaaaatcaagaaattgattcgagtgtagcccaatcgaaaaccgaatattcttac
caaccaccagacaacacagtgaagaagatcatgacaactccactgctcgaatatttgaaa
cttcgtaagcaggagaaacaacgtcttagggatgagaaacgtgaggaaaggcgacgaagg
gatatggaaaggcggagaaccaaagacgatcctgttatctctaaggttttaaggaatccg
gatctggataaagaatcgagtaaagacgataaagagaataaagaagagagagataaactt
tcaccgaaggagctgaaaaatagaaacaaaaaagacgataaaataagagaaaaaccaatg
cgagatcgagaaattaaacctatcattaaggggtatagagagcgaattgacgatagaaat
aaggaaagagaggttaaacaacggcgatacgatgagaaaaagccttatggaagacgcgat
gatagagaggagaggagaatcgatctccgagacgacaggaggtacgagataaaggaagag
tttagggagtccagagacagaaaggtggaggaaagacgtgggaaaagttacgaaaaaatg
agacaagagaaaaagaagttggcggagacgaaaaaacagattgctgatgctaatggagac
gatacaaattcgaagaaagccaaggaggaacacgatattttacaggaaagggaaaatgaa
aatggcaaagagtctatctataatggagatgacttgaggcatgccaaagacaacgaatgt
gagcaacgtaatactgccgaggatagagtaacggggacagacgcgatacaaaattgccgg
gatagtttggaagaaggaaaggattcagtcaatgcagatgctaacgatgaagacgattcc
aaagataaagaatcaaaagttgtaaagagacgtaattcccttgaaagtggtggcgaaggc
ggcgcaggtgatggcaactgtttacgacgtcacaagtcgttagatggaggaggccaaagt
aatcttcagaaaaatgataacgaggagaaagaaaaagacaagaaagatccacgattggag
cgtagaatacgaaataaggatcgcccggcgatggagatttatagacctggtatgggcaag
tttagcaaacagcggcttgaacgcgagaaatctagcgacgaacgtgcgtccctgtcgcaa
agtcccacgccaaaccccagcgcttcctctacgaccggcaagtctggaaaagttggtgcg
acggaaatatacatcgatgacgctttgacttctgcatacagcagatttgtcatgtataat
tttccttgtactgtataa
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