Solenopsis invicta (red fire ant): 105205707
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Entry
105205707 CDS
T03916
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04140
Autophagy - animal
soc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105205707
04148 Efferocytosis
105205707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
soc04131
]
105205707
Membrane trafficking [BR:
soc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105205707
Hops complex
105205707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
PipB2_N
Motif
Other DBs
NCBI-GeneID:
105205707
NCBI-ProteinID:
XP_011173487
LinkDB
All DBs
Position
5:19033508..19039812
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AA seq
830 aa
AA seq
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MSAMLTADWFPLGRDIYFRKFELYPISFQHEISSNNLLVAAPYGGSIAVTRNPRKLVKVQ
GASKPLILLYTSSGKLTAKLQWSSGQLVSFGWSQQEELLCVQDDSMVLIYDMFGTYQHTF
SMGNAAKDTKVVDAKFFVTSNSTGIAVLTSTNRIFLVNNVSEPKVRPITDMPRYGPIDCW
YMVHCDRETQVILSNREGIFVIHQSHQNTYSFNNLFSNKINNVTAITVSSNNRHIALYSD
TGHVYIGSIDFREKYCECYTNMKEPLANIAWCGTEAVVCSWNSTIMVVGRTADTIVYNYD
GPVHLVTEIDGVRVLSSSSHEMIQKVPNVVQRIFRINSTDPASYLLEASKQFQKKSHKAD
SYIDLVKDKLDSAIKACIDGASHEFDFETQKILMRAAKFGKGFSKTIDSEYYVQMCRILR
VLNAVRHPAVGIPLTYTEFNILTNQVLLDRLVARRHYYLSIQIARHLQLPEIDGESRILA
HWACYKVKQTQLDKEQIAEEIADKLGYAPGVSYSEIAKRAADCGRKQLAIKLIDYEPRAH
QQVPLLLTLGEERAALHKAVESGNTDLVYTVILHLRENMTLGDFQMSIMHCPLAMALYIK
YCQSHNRETLRDIYNQYDDFHSQAVWFITESYQRKNMMSRDALLQSAQENFRLARNDTNA
SLTEEQIKLLKYQRSLEDTLHESVVGKPLHDTVRILLLRNELKLADKLRSEYKIPDRRYW
WLRIQCLAEQGLWNDLEKFSKSKKSPIGYEPFIDECLKYNEKLEARKYLAKVKDDLKVKY
LVKLNLLSEAAQTAYEQKDVSALTFVLAQCGSSDRQFVDKINMLLTSLKN
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgatgttaacagccgattggtttcctctcggacgggacatatattttcgcaaa
ttcgagttgtatccaatatccttccagcatgagatttccagcaacaatctgctggtggcg
gctccctacggaggctccatcgctgtgacgagaaaccccagaaagctcgtcaaggtccaa
ggagccagcaagcctttgatactgctgtacacatcatctggaaaattgacggccaagctg
caatggagtagtgggcaactggtgtcatttggctggtcccagcaagaagaattgctctgc
gtgcaagatgatagcatggttcttatatatgatatgtttggaacttatcagcatactttt
agcatgggaaatgcagccaaggatactaaggttgtcgatgcaaaattctttgtaacatcc
aacagcactggaatagctgttttgacatccaccaatcgtatatttctagtgaataatgtg
tctgagcctaaagtccgaccaatcactgatatgccaagatatggtccaatcgattgctgg
tacatggttcattgtgatagggagacacaagtgattttgtcgaatagagaaggaatattt
gtaattcatcaatcccatcagaacacttattcatttaataatctctttagtaataagatc
aataatgtgacagcgataactgtgtctagcaacaatcgacacattgcgctttactccgat
accgggcacgtgtacattggttcgatagacttcagagaaaagtattgtgaatgttataca
aatatgaaggaacctctggcgaatatagcttggtgcgggacggaagccgtggtgtgcagt
tggaacagtacgataatggtggtgggacgtacggctgataccatagtatacaattacgat
ggaccagtacacttggttacagaaattgacggagtgcgagtgttgtcgagcagttctcac
gaaatgatacagaaagtaccaaacgttgtgcaaaggatatttaggatcaactctacggat
cctgcttcctatcttctggaggcgtctaagcagtttcagaagaagagccacaaggccgac
agttacatagatttagtgaaggacaagctggactctgcgataaaagcgtgtatcgatggc
gcgagtcacgaattcgattttgaaacgcaaaagattctaatgagagctgccaaatttggg
aaaggattcagcaagaccatagattcggaatattatgttcaaatgtgcaggattttgaga
gtcttgaatgcagtaaggcatcctgcagtgggcattccattaacatatacagaatttaac
attctcacgaatcaagtgctattagatcgactggtagcacggagacattattatttaagt
attcaaatagcgcgtcatttacagttacccgagattgacggagaaagtagaatattagca
cattgggcttgctacaaggtgaaacaaacgcagttagataaggaacaaatagcagaagag
attgctgataaattaggatacgctcctggcgtttcgtacagcgaaatcgcgaaaagagca
gccgattgcggacgaaaacaattagctattaaattaatcgactacgaaccacgtgcacat
caacaagtacctttgttattgacacttggtgaagagcgtgccgctttgcataaagctgta
gaaagtggcaatacggatctagtctatactgttattcttcatcttagagaaaacatgact
ctcggagattttcaaatgtctataatgcattgtcctctagcgatggcattatacattaaa
tattgtcagagccataatagagagacattgcgcgatatttataatcaatatgacgatttc
cattcacaagcggtgtggtttattaccgagagttatcaacgaaaaaatatgatgtcgagg
gacgcgttattgcaatccgctcaggaaaatttcagattggctcgtaatgatactaacgcg
tcattaacggaagaacagataaaactgctaaagtatcagaggtctttagaagacacgctg
cacgaatcggtcgtgggaaagcctctgcatgatactgtgagaatattattattgcgtaac
gagttgaaattagcggataaattgcgatcggagtataaaataccagatcggagatattgg
tggttaagaatacaatgcttggcggaacaaggtttatggaatgatttagaaaaattctcc
aaaagtaaaaaatctcccattggctatgagccgtttatcgatgaatgcctaaagtataat
gagaaattagaagcaaggaaatacttagccaaagttaaagatgatcttaaggtgaaatat
ctagtgaaattaaatttgcttagcgaagccgcgcaaacagcgtatgagcaaaaggacgtt
tcggctctcacatttgtgctggcacaatgcggatcgtcggatagacaatttgtggacaaa
atcaatatgttattaactagtcttaaaaattaa
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