Solenopsis invicta (red fire ant): 105207825
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Entry
105207825 CDS
T03916
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03022
Basal transcription factors
soc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105207825
09124 Replication and repair
03420 Nucleotide excision repair
105207825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soc03021
]
105207825
03400 DNA repair and recombination proteins [BR:
soc03400
]
105207825
Transcription machinery [BR:
soc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105207825
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105207825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
IBR
Motif
Other DBs
NCBI-GeneID:
105207825
NCBI-ProteinID:
XP_025996689
LinkDB
All DBs
Position
7:complement(109540..113328)
Genome browser
AA seq
401 aa
AA seq
DB search
MAEEESEEKEYRWETGYEKTWEAIKEDDHGLLEASVADIIHNAKRKRQLERKQGARLGMM
RHLYVILDASESMSSQDLKPTRFLCSLKLLEDFIEEFFYQNPISQLGVIITRNKRAEKVS
DLAGNSKKHIKELQVLQQTTVGGEPSLQNSLELATKLLKLLPSHASKEILVIIGALTTCD
PGDINETIRNMKLDGIRCSVIGLAAELYICKRMANLTGGEHSVALDDKHYKEQLNAHIDP
PPAATRLDAALVKMGFPHHALHSSAPDTSMTVCMCHAQNSDEPVKLMTTGYLCPQCLSKH
CELPVECRACGLTLVSAPHLARSYHYLFPVDPFKEIASESDHSFCFGCQKALAQKDKKVY
TCGKCNQTFCLDCEIFIHEILHTCPGCAINPETYKKSTDRS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaagagtccgaggaaaaagagtaccgttgggagactggttatgaaaagacg
tgggaagcgatcaaggaagatgaccatggcttgttggaagcttccgtcgcagatattatt
cacaatgctaagagaaaacgtcagttggaaagaaaacaaggtgccaggctaggaatgatg
aggcatctctatgttatcttagatgcttccgaatccatgtccagtcaagatttgaagcca
acccgctttctatgctctctaaagcttttggaagactttatcgaagaatttttctatcaa
aatcccataagtcaattaggtgtaattataactagaaacaaaagagctgagaaagttagt
gatttggctggtaactcaaagaagcatattaaggaattgcaagtgttacaacaaactaca
gtaggcggcgaaccttctttgcaaaattctttagaattagctacaaagttattaaaatta
ttaccgtctcacgctagtaaagaaatattggtaatcataggagccttgactacatgtgat
cctggagacattaatgaaacgattcgaaatatgaaattggatggtattaggtgtagcgta
ataggattggccgctgaattgtacatctgtaaacgaatggcgaatctcaccggtggcgaa
cacagcgttgcgctcgatgataagcattacaaggagcaattgaatgcacatatagatcct
ccgcctgctgcaacacgattagatgcagcgcttgtaaaaatggggtttcctcatcatgct
ttacattctagtgcaccagatacatctatgacagtgtgtatgtgccatgcacaaaattcc
gatgagccggttaaacttatgactactggctatctttgtcctcaatgtctcagtaaacat
tgtgagcttcccgtggaatgtagagcttgtggtcttactttggtatctgctccacattta
gcacgatcgtatcattatctatttcctgttgatccttttaaagaaattgcatctgagagc
gatcattctttttgctttggctgtcaaaaagctcttgctcaaaaagataaaaaggtatat
acatgcggaaagtgtaatcaaacattttgtttagactgtgaaatatttattcacgagata
ttgcatacgtgtcctggttgtgcgataaatcctgaaacatacaaaaagtctacagataga
tcttaa
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