KEGG   Sodalis praecaptivus: Sant_2455
Entry
Sant_2455         CDS       T03004                                 
Symbol
ycfD
Name
(GenBank) Cupin 4 family protein
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
sod  Sodalis praecaptivus
Brite
KEGG Orthology (KO) [BR:sod00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sod03009]
    Sant_2455 (ycfD)
Enzymes [BR:sod01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     Sant_2455 (ycfD)
Ribosome biogenesis [BR:sod03009]
 Prokaryotic type
  ribosomal protein modification factors
   Sant_2455 (ycfD)
SSDB
Motif
Pfam: JmjC_2 ROXA-like_wH Cupin_2 Cupin_1 7TMR-DISMED2 AraC_binding Cupin_8 TAD2
Other DBs
NCBI-ProteinID: AHF77495
UniProt: W0HZ70
LinkDB
Position
2852114..2853235
AA seq 373 aa
MDYQLELDWNDFLQRYWQKRPVIIKRAFRDFVDPLSPDELAGLAMEAEVDSRLVSHDDGV
WQVNHGPFASYDQLGDHNWSLLVQAVDHWHEPSAALMQPFRRLPDWRIDDLMISFSVPGG
GVGPHLDQYDVFIIQGQGRRHWRVGDKIPLKQHCPHPDLLQVEPFEAIIDEQMEPGDMLY
IPPGFPHEGYALENALNYSVGFRAPSSRELVSGFADYVLAQELGGQRYSDPAIPSRDDPA
HILPAEVDALRAMMMALMQQPDQFNQWFGEFISQSRHELDLAPPEPPYQAGEIYDLLNQG
ESLFRVGGLRVLRVGDDSYVNGEKIVTPHRAAAAALAARYDISREQLGDALEDPSFLALL
AGLINSGYWYFKN
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggattatcaacttgagttggactggaacgactttctacaacgctactggcagaaacgc
ccggtaatcattaaacgcgcatttcgcgacttcgtcgatccgctatcgcctgacgaactg
gccggcctggccatggaagccgaagtggacagccgtctggtcagccatgacgatggcgtt
tggcaggtgaaccatggtccctttgccagctacgatcagttgggggaccacaactggtcg
ctgctggtacaggcggtcgatcactggcacgaaccctcggcggcgctcatgcagcccttc
cgtcgcttgcctgattggcgcatagacgatcttatgatttcgttttcggttcccggcggc
ggcgtcggccctcatctcgatcaatatgatgtgtttattattcagggccagggccgccgg
cactggcgcgtcggcgataaaatcccgctgaaacagcactgtccccatcccgatttgctc
caggtcgagccctttgaggcgattatcgacgaacaaatggagcccggcgatatgctgtat
attccgcccggcttcccccatgaaggctatgcgctggagaacgcgctgaattattccgtc
ggcttccgggcgccgagcagccgcgagctggtcagcggttttgccgattatgtgcttgcc
caggaactgggtggccaacgctacagcgacccggcgatcccgtcgcgcgacgatcccgcc
catatcctgccggcggaagttgatgcgctgcgcgccatgatgatggcgctgatgcagcag
cccgatcaattcaatcaatggtttggcgaatttatttcccaatcgcgccatgagctggat
ttggctccgccggagccgccctatcaggccggggaaatctatgatttgctcaatcagggc
gaaagcctgtttcgcgtcggcgggctgcgggtgctgcgggtcggcgatgacagctacgtc
aacggcgaaaagattgtgacgccacaccgtgccgccgccgccgcgcttgccgcacgttac
gacatcagtcgggaacagctaggcgacgcgctggaggatccctcgttcctggcgctgctg
gcgggcctgattaatagcggctattggtattttaaaaactga

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