Sodalis praecaptivus: Sant_P0180
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Entry
Sant_P0180 CDS
T03004
Symbol
oprB
Name
(GenBank) Carbohydrate-selective porin
KO
K07267
porin
Organism
sod
Sodalis praecaptivus
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sod02000
]
Sant_P0180 (oprB)
Transporters [BR:
sod02000
]
Other transporters
Pores ion channels [TC:
1
]
Sant_P0180 (oprB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
AHF79226
UniProt:
W0HZG1
LinkDB
All DBs
Position
pHS1:213604..214950
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AA seq
448 aa
AA seq
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MKKFICQSGTLLILASVIAAPSFAEDQWFSPTGKHLTGDWGGLRSDLAQQGYVFSLDYSS
MVASNVAGGYDRNKTLRYSDQYTFGTKLDLEKIAGIPHAEFVFSLNDRNGRDLTADRIQD
PRVPVIGSGVQSNYGRGQTWHIGQLWYRQQWLDNKLDVKLGRMPIGEDFDNSGCFFQNLS
LCGSLAGHGSGVWYNAPVSQWGARIRLNIDKSYYAQVGAFLHNPSYLTRRGSFKMNLSGR
TGNMYVGELGYLSQLGVNKLPGSYKIGGWYNTVDAADVLKDDDGNDYVTSHKSARMHDGR
YGGYLYLLQQVTMVGDNKNRGLSLFVHLAANDKDTSTMDYQTQVGAIFKGPFASRPNDFV
GLGASKMHVNSRLAHRAELVNSSKGISDYDDPAYQPVRGAEYAAELHYSAAITPWFTVRP
NIQWLAHPGGVREVKDAWVLGAQTTLSF
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttatttgccaatccggtacgctgttgattttggcctctgtgatcgctgcc
ccctcctttgctgaggatcaatggttttcaccgacagggaaacatctcaccggggactgg
gggggacttcgtagcgacctggcgcaacaaggttacgtgttttctctggattattcgtca
atggttgcctctaatgtggcgggtggttatgatcgtaataaaacattacgttacagcgat
caatacaccttcggcaccaaacttgatctggagaaaattgcgggcattcctcacgctgag
tttgttttttcgcttaatgatcgcaacgggcgcgatctgacggcggacagaattcaggat
ccccgtgttcccgtgattggatccggcgtgcaaagcaactatggccgcggtcagacctgg
catattggtcaattatggtaccgtcaacagtggttagacaataagctagacgtgaaactg
ggacgtatgccgattggtgaagatttcgataatagcggctgtttttttcaaaatttgtcc
ctgtgcggatctctcgcgggtcacggttcaggagtttggtataatgcgccggtgagtcag
tggggcgcacgcatcaggcttaatatagataagtcttactatgcgcaggttggcgcattc
ttgcacaatccttcctatttgaccaggagggggagtttcaaaatgaacctcagcggccgg
acgggaaatatgtatgtcggcgaactgggatatttgagccaattaggcgtcaataaattg
ccaggcagttataagatcggcggatggtacaatacagttgatgcggcggatgtgctcaaa
gacgatgacggtaatgattatgtgacctcacataaatccgcccgcatgcatgatggacgc
tatggcggctatctctatttgttacaacaagtaaccatggtgggggataataaaaatcga
ggtctgtctctatttgtgcatctggctgcgaacgataaagacacatcaaccatggattac
caaacacaagtgggcgctattttcaaaggaccttttgcttcacggcccaatgattttgtt
gggctgggcgccagtaaaatgcacgtcaacagccggctagcccatcgcgctgaactggtc
aacagcagtaaaggcattagtgattatgatgatcccgcgtatcaacccgtgaggggcgct
gaatacgctgcggaattgcattatagcgcggcgatcacaccctggtttaccgttcgtccc
aatatacagtggcttgctcatcctggcggcgtccgcgaagtgaaagatgcctgggtatta
ggcgcgcaaaccaccctttcattctga
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