Spinacia oleracea (spinach): 110787679
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Entry
110787679 CDS
T05137
Name
(RefSeq) uncharacterized protein LOC110787679
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03013
Nucleocytoplasmic transport
soe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110787679
03015 mRNA surveillance pathway
110787679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110787679
03041 Spliceosome [BR:
soe03041
]
110787679
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110787679
Spliceosome [BR:
soe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
110787679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Cornifin
Motif
Other DBs
NCBI-GeneID:
110787679
NCBI-ProteinID:
XP_021848013
UniProt:
A0A9R0IFE9
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Position
6:complement(104106316..104113312)
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AA seq
886 aa
AA seq
DB search
MSGGFFRGTSAEQDTRFSNKQAKLLKTQKFPPELEHLVDITKVKMDVIKPWIAKRVTELL
DGFEDEVLINFIHELLEGKVVNGKQIQIQLTGFMEKNTGKFMKELWSLLLSAQKNASGVP
QQFLDAKEEETKKKKAENDRIFDEIQRRKEKEAKESEQEKERQMDDGLGKYSTEESNRRR
ERGSGVQSGDEDGAGVRNGFGGRSRASKSPSAHSQSPRREKSASRSTSSSPRGKERSVSP
ERRQRSPRRRSITPRRRSARESVSPRRRSISRRRSSPRTRYRSPSPMRRRVRSPARRRSP
SPIRRLSPSPTKRRSPSPFRRRSRSPLRRRSPSPRRRRSPSPLRRRSPSPRRRRSPSLVR
RRRRRSSSSPRSRSPGQRRSPSPVRRRFQSPVRRSSFPVRRRSPSPARRRSPSPSPARRR
PLSPARRRLLSPSRRRSPLARGRRSPSPAEHRSLASDRRKSPVPARRRSPTHSPSRSPSP
ASRSSKSPARGISTSPVKMRSPRIQKSPHESPRERNRDHEPAVITHRQPISLSPQRDHSN
RKPSHRNVPSVSPPPEKSNVVSPQIRTKTSGEDRRLVILHDSPRNNAGDKTTLNGSRSPT
RLRDQKVRHGSPKTSEGKFENNREYKVDKYKLEGKRAACSRKSPERSSSYRHRDIADARQ
ENNEKISEEASLKEIRALKKSPPRGSVISVSGERSDILYLGDVSKLDEKRNSQQKDMRDN
TMSDSLDNPINKRRSRSFDSDSGSEESEKHRAEVSEKRKHRRSRRREVASDDTSSESEME
DRKEAKRKKKEEKKVRKEERRRRREERRRRKEDKRANKRKRKSKDADAMSSDVENNEKNA
DASNGERRTRKHSSDEEETESQKKRLEIELREKALESLRAKKGISR
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggctttttccggggtacgtctgctgagcaagacactcgattctcaaacaag
caagcaaagttgctcaaaacgcagaagtttcctccggaactcgaacatttggttgatatt
acgaaagtgaaaatggatgttatcaagccgtggattgcgaaaagagtgaccgaactactt
gatggatttgaagacgaagtgctcattaactttatccatgaacttctggaaggaaaggtg
gtaaatggaaagcagatccaaattcaactgactggtttcatggaaaagaacactggtaag
ttcatgaaagagctctggtcgcttcttctcagtgcccagaaaaatgctagtggcgtcccc
caacaattcctggatgctaaggaggaggaaaccaagaagaaaaaggcggagaatgatcgt
atctttgatgaaattcagagaaggaaagaaaaggaggctaaagaatccgagcaagagaaa
gagaggcaaatggatgacggacttggcaaatattctaccgaggaatcaaatagaaggcga
gagagaggttctggtgtgcaatctggagatgaggatggagctggtgtgagaaatggtttt
ggaggaagatccagggcatccaagtcaccatctgctcattcccagtcacctcgtcgagaa
aaaagtgcatcgaggagtacttctagttctcctagggggaaagagcgttcagtttctcct
gaaagaagacagcgatcaccccgaagaagatctatcactcccaggaggaggtctgcccgg
gagtctgtatctccaaggaggaggtctatatcgagaaggcgatcttcacctcgtacacga
tatagatccccatctcccatgaggcgtagagttcgttctccagcacgtagaaggtcacca
tctcccattcgacgactttcaccttctcctaccaaaaggaggtcaccttcacctttccga
cgtcggtctcgttcacctttacgacgtcggtccccttctcccaggaggcgtcggtcaccg
tctccgttgcgtcgccgatcaccatcccctaggcgacgcagatccccttctcttgttcgc
cgccgtaggaggaggtcctcttcaagtccgaggtctcggtctccaggtcagcgtaggtct
ccgtctcctgttcgacgtcggttccaatctcctgtccgaaggtcttcctttccagttcga
cgtaggtccccatctcctgctcgacgtaggtctccgtcgccttctcctgctcgacgaagg
cccctgtctcctgctcgacgtaggctcctgtctccttctcggcgtaggtccccgttggca
aggggacgcaggtctccatctccagcggaacacagatcattagcttcagatcgaagaaaa
tcacctgttccagctcgtaggaggtcgcctactcattcgccaagcagatctccatcacct
gccagtcgaagttccaaatcccctgccaggggtatctctacttcaccggttaagatgaga
tcacccaggattcagaaatccccacatgaatctcctagagaaagaaacagggaccatgag
cctgcagtaatcacgcatagacaacctatttcattgtccccccagagagatcattctaac
agaaaaccctcacacagaaatgttccatctgtctcacctcctccagagaagtcaaatgtg
gtgtcaccacaaatccggactaagacttctggtgaagataggaggttggtcattcttcat
gatagccctagaaacaatgcaggagataaaaccactcttaatggaagtcgaagccctact
agattaagagatcagaaagttcgtcatggaagcccaaaaacaagtgaagggaaatttgaa
aataacagagagtacaaggtggacaagtacaagttagaaggaaaaagagctgcatgctcc
aggaaatctcctgaacgatcgagcagctaccgacatcgtgacattgctgatgcaaggcag
gagaacaatgagaaaataagtgaagaagcgtctttgaaggaaatccgtgctttaaaaaag
tcaccgcctagaggttctgtaatatctgtatctggtgaaaggtctgacatattatacctt
ggggatgtttccaaattggacgagaagagaaactcccaacaaaaagatatgagggacaac
actatgtctgactccttggataatccaatcaataaaaggagaagtcgtagttttgactct
gattctgggtctgaggaaagtgagaagcatagagctgaagtttctgagaagaggaaacat
agaaggtcaaggcgaagagaagtagcttcagatgatactagttccgaatctgagatggag
gacagaaaggaagctaagagaaagaagaaggaagagaagaaagtgcggaaagaggagcgg
cgtagacgccgtgaggagcgacgtcggagaaaggaagataagcgtgctaataaacggaag
cgaaagtcaaaagatgctgatgctatgtcttctgatgtggaaaacaatgaaaagaatgct
gatgcttcgaatggtgaacgtcgtacgaggaagcattcaagtgatgaagaagagacagaa
tcacagaagaaaaggctggagattgagctacgtgaaaaggctcttgagtcactgagggca
aagaagggcattagccgctga
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