Spinacia oleracea (spinach): 110803360
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Entry
110803360 CDS
T05137
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110803360
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
soe01002
]
110803360
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soe04121
]
110803360
Enzymes [BR:
soe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110803360
Peptidases and inhibitors [BR:
soe01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110803360
Ubiquitin system [BR:
soe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110803360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
110803360
NCBI-ProteinID:
XP_021864562
UniProt:
A0A9R0JB52
LinkDB
All DBs
Position
5:complement(31399182..31413535)
Genome browser
AA seq
1117 aa
AA seq
DB search
MTVMTPAPIDQEDDEMLVPHSDIAADNHQPMEVVAQAEPANNPENQPAEDPPSSRFTWRI
ENFTRLNAKKHYSDAFVVGGFKWRILIFPKGNNVDYLSMYLDVADSPSLPYGWSRYAQFS
LAVVNQIHNKYSVRKDTQHQFNSRESDWGFTSFMQLSELYDPSRGYLVNDTVLVEAEVAV
RKIVDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDIPSAS
IPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTV
VEGTIQQLFEGHHMNYIECVNVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEG
DNKYHAEQNGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDR
EDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDL
KRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIMCNVDEKDIAEH
LRERLKREQEEKEHKKKEKAEAHLYTIIKVARDGDLTEQIGKDIYFDLVDHDKVKSFRIQ
KQMPFNIFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPVEETQSVGQLREVSNK
VHNAELKLFLEIELGIDLRPIPPPEKTKDEILLFFKHYDPEKEEMRYVGRLFVKATGKPG
EILGKLKELAGYAADDEIELYEEIKFEPTVMCEHIDRKLTFRGSQLEDGDIVCFQKSLSA
ESAEKCRYPDVPSFLDYMHNRQVVHFRSLERPKEDDFCLELSRLHTYDDVVERVARQLGL
DDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGL
KTLKVAFHHATKDEVTIHTIRLPKQSTVGDVLNDLKTKVELSHPDAELRLLEVFYHKIYK
IFPPNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKETAQNQMQIQNFGEPF
FLVIHEGETLSEVKVRIQKKLQVPDEEFSKWKFAFLSLGRPEYLQDTDVVSSRFQRRDVY
GAWEQYLGLEHADTAPKRTYTANQNRHTFEKPVKIYN
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaatgactccggctcccatcgaccaagaagatgatgagatgcttgtcccacat
tctgatatagcagctgacaatcaccagcctatggaagttgttgcgcaagctgagcctgct
aataatcctgagaatcaacctgcggaggaccctccatcatccaggtttacatggagaatt
gagaatttcacccggttaaatgccaagaagcattattcggatgcgtttgtcgttggtggt
ttcaaatggcgaatactaatttttcccaaagggaacaatgtggactacctttctatgtat
ctcgatgtagctgattctcccagtttgccttacgggtggagtaggtatgcacagttcagc
ttagctgtggtcaatcaaattcataacaagtattccgtgagaaaagatacgcagcatcag
tttaattctcgcgaaagtgattggggatttacgtcttttatgcaattaagtgagttatat
gaccccagcagaggatatcttgtaaatgatactgttcttgtggaggctgaggttgctgtt
cgtaagattgttgactattggtcctacgattcgaaaaaagaaacaggatatgttggactt
aagaatcagggagctacatgctacatgaattctctgcttcagacactttttcacattcct
tactttagaaaggctgtgtatcatatgcctacaactgaaaatgatattccatctgcgagt
attcctctggctcttcagagtttattttataagctccaatacagtgacagcagtgttgca
acgaaagaattgaccaaatcttttggatgggatacttatgattctttcatgcagcatgat
gtccaggagttgaatcgggttctttgtgaaaagcttgaagacaaaatgaagggtactgtt
gttgagggaactattcagcaattgtttgaagggcatcacatgaactatattgaatgtgta
aatgttgattacaaatctacaagaaaggagtccttttatgatcttcagcttgatgtcaaa
ggttgtcgtgatgtttatgcttcttttgataagtatgtagaagttgaacgactggaaggt
gataacaagtatcatgctgaacagaatggtttacaggatgctaggaagggtgtcttattc
attgattttcccccagttcttcaactgcagctcaaaagatttgaatatgattttatgcgt
gataccatggtgaagataaatgaccgctatgaattccctcttgagcttgatctggatcgt
gaggatgggaaatatttatctcctgatgctgatagaagtgtccgtaacctttacacactc
cacagtgttttggtccacagtggtggggtgcatggtggacattattatgccttcataagg
cctactctttccgatcagtggtacaagtttgatgatgaacgagttacgaaggaagatttg
aagagagctttggaggagcagtatggtggagaagaggagttgccgcagacaaatcctggt
ttcaacaacactccattcaagttcacaaaatattcaaatgcgtatatgcttgtttatata
cgtgaaagtgacaaagataagattatgtgtaatgtggatgagaaggacattgcagaacat
cttagagaacgcttgaagagagaacaagaagagaaggagcataagaagaaggagaaggca
gaggcacacctttataccattataaaggttgcacgagatggtgacttgactgagcaaata
ggaaaggatatctattttgatcttgtagaccatgacaaagttaaatcttttcgtattcag
aagcagatgccatttaatattttcaaggaggaggttgctaaagaattcggaatcccagta
caatttcagcggttttggctgtgggcaaagcgccaaaatcatacatataggccaaatcga
ccgttgacacctgtggaagaaacccaatctgttggacagctaagggaagtatctaataaa
gttcataacgcagaacttaaactattcttggaaatagagcttggtatagatttacgacct
attccacctccagaaaagacaaaggatgagattctgttattcttcaagcattatgatccc
gagaaagaagagatgcgttacgttgggaggctttttgttaaggccactggtaaaccagga
gaaattttaggaaagttgaaggaattggctggctatgctgctgatgatgaaattgaatta
tatgaggaaatcaagtttgaaccaactgttatgtgtgaacatattgaccgaaaactcaca
tttcgtggtagccagcttgaagatggggacatagtctgtttccaaaaatccctttcagct
gaaagtgcagaaaagtgccgctatcctgatgttccatcgttcttggactatatgcacaat
cggcaagttgttcatttcagatcattggagagacccaaggaagatgatttttgtctagag
ttgtcaagacttcatacgtatgatgatgtggtggaaagagtagctcgtcagcttggtttg
gacgatccatccaaaattaggctgacttctcacaactgctattctcagcaaccgaagccc
caacctataaagtatcggggtgtggatcatttgtcagacatgctggtccactacaaccag
acttctgacatactgtactacgaagttctggacatacctttgccagaactacaaggctta
aaaactttgaaagtcgctttccatcatgcgacaaaagatgaagtaaccattcacactatt
agactgcctaaacagagtacagtgggagatgttcttaatgatttgaagacaaaggtggaa
ttgtcacatcctgatgctgagctgaggctacttgaagtattttatcacaagatctataag
atattcccacctaatgaaaagattgagaatataaatgatcagtactggacattacgagca
gaagagattcctgaagaagagaagaacctgggtcctcatgatcgacttattcatgtgtac
catttcacgaaggagacagctcaaaaccaaatgcaaatacagaatttcggtgagccattt
ttcttggtgatccatgaaggagaaactttgtctgaggtcaaggtgagaatacaaaagaaa
ttgcaggttccagatgaagagttttccaagtggaagtttgcatttctttcattaggtcgt
ccagaatacctccaggacactgatgttgtgtccagtcgttttcagagaagagatgtttat
ggtgcttgggaacaataccttggattagaacatgctgacacagcacctaaaagaacttac
acagcaaatcagaatcgtcatacatttgagaagcctgtaaaaatctacaattag
DBGET
integrated database retrieval system