Serratia odorifera: NCTC11214_03696
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Entry
NCTC11214_03696 CDS
T06612
Symbol
hpaIIM
Name
(GenBank) Modification methylase HpaII
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
sof
Serratia odorifera
Pathway
sof00270
Cysteine and methionine metabolism
sof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
NCTC11214_03696 (hpaIIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sof03000
]
NCTC11214_03696 (hpaIIM)
03032 DNA replication proteins [BR:
sof03032
]
NCTC11214_03696 (hpaIIM)
03036 Chromosome and associated proteins [BR:
sof03036
]
NCTC11214_03696 (hpaIIM)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
sof02048
]
NCTC11214_03696 (hpaIIM)
Enzymes [BR:
sof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
NCTC11214_03696 (hpaIIM)
Transcription factors [BR:
sof03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
NCTC11214_03696 (hpaIIM)
DNA replication proteins [BR:
sof03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
NCTC11214_03696 (hpaIIM)
Chromosome and associated proteins [BR:
sof03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
NCTC11214_03696 (hpaIIM)
Prokaryotic defense system [BR:
sof02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
NCTC11214_03696 (hpaIIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Methyltransf_15
Methyltransf_25
ResIII
Motif
Other DBs
NCBI-ProteinID:
VDZ61286
UniProt:
A0A447KVF1
LinkDB
All DBs
Position
1:3391258..3392220
Genome browser
AA seq
320 aa
AA seq
DB search
MDTKLIAIDFFCGCGGASEGLRQAGFDVVLGIDVDQQASETYKANFPDADFIFDDIRNVT
VERVANSIAFKSADGLLLSACAPCQPFSQQNKYKNKDDERICLLDETHRFVSRLLPEYIF
LENVPGIQKIDGSKESPFTRFISLLDKLNYHYVYFVANAEKYGVPQRRKRFVLLASLLGP
ISIPEPTHDIENSPVKTVREFIGEYPKLASGEVDKNDELHRSAILTELNLERIKNTPEGG
DRRDWPTNLINTCHKDYTGHTDTYGRMSWDKPAPTLTTKCNSYSNGRFGHPDITQNRAIS
IREASRLQTFPKKYIFKGSF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggatactaaattgattgcaatagatttcttttgtggatgtgggggagctagcgaaggg
ctacgtcaggccggttttgacgttgttcttggcattgatgtagatcagcaggcctcagaa
acatacaaagctaacttccctgatgctgatttcatcttcgatgatatcagaaatgtaact
gttgaaagggttgcgaactctatagcattcaaaagtgcagatggtttgcttttaagtgcc
tgcgccccttgccaacctttctcacagcaaaacaaatataaaaacaaagatgatgaaagg
atttgcctcctagacgaaactcaccgcttcgtttcaagacttttaccagaatatattttt
ttagaaaatgttcctggtatacagaaaattgatggtagtaaagaaagtcctttcacaaga
tttatttctttgcttgataagctaaactaccactatgtgtattttgtggcaaatgctgaa
aaatatggcgtgccgcaaagaagaaaacggtttgttcttctggctagtttgctaggacca
atatcaataccagagccaactcatgatatagaaaattcacctgtaaaaacagttagagaa
tttattggtgaatatccaaaacttgcatcgggagaagtcgataaaaatgatgaactacat
cgttcggcgatcctaactgagttgaatttagagagaataaaaaataccccagaaggaggg
gatcgcagggactggccgaccaatttaatcaacacttgtcacaaagattatactggccat
acagatacctatggcagaatgtcatgggataaacctgctccgaccttgacaacaaagtgc
aatagttattcgaatggacgttttggtcacccagatataacacaaaatcgagctataagt
attagagaagcttctcgactacaaacatttccaaaaaaatatatatttaaaggttctttt
taa
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