Shewanella oncorhynchi: RA178_07565
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Entry
RA178_07565 CDS
T09381
Name
(GenBank) NAD-dependent epimerase
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00053
Ascorbate and aldarate metabolism
sog00520
Amino sugar and nucleotide sugar metabolism
sog00541
O-Antigen nucleotide sugar biosynthesis
sog01100
Metabolic pathways
sog01240
Biosynthesis of cofactors
sog01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
RA178_07565
00520 Amino sugar and nucleotide sugar metabolism
RA178_07565
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
RA178_07565
Enzymes [BR:
sog01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
RA178_07565
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
NAD_binding_10
adh_short
KR
adh_short_C2
Sacchrp_dh_NADP
NmrA
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
WMB74460
UniProt:
A0AA50KFG4
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Position
1661709..1662716
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AA seq
335 aa
AA seq
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MKYLVTGAAGFIGSAVAKRLCNQGHQVVGLDNLNDYYDVSLKHARLAQLAAQKLFSFKQL
DLSDRDAITELFKAEQFDRVIHLAAQAGVRYSIENPHAYADSNLVGHLNILEGCRQTKVK
HLIYASSSSVYGLNSKTPFATSDTVDHPVSLYAATKKANELMAHSYSHLYDMPTTGLRFF
TVYGSWGRPDMAPFIFTKKILEGETIDINNNGDMWRDFTHVDDIVEGVIRIADVIPTRND
VWTVETGTPASSSAPYAVYNIGHGSPINLMDFVKAIEDELGIVAKKNFREMQPGDVYQTY
ADTQDLFAVTGYQPKVGVKEGVAEFVAWYRNYHRI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatttggtcaccggcgccgccggttttattggcagcgccgttgctaaacgttta
tgtaaccaaggccaccaagtagtcggccttgataaccttaatgactattatgatgtaagc
cttaaacacgcgcgtctcgcccaattggccgctcaaaagctatttagctttaaacaactc
gatttgtccgaccgcgatgccattactgaattatttaaagcggagcagttcgatcgggtg
attcacttagccgcccaagctggcgtacgttattcaattgaaaaccctcacgcatatgca
gattctaatttagtaggacatctcaatattcttgagggatgtcgtcagaccaaagtcaaa
catttaatctacgcatcttctagttctgtctatggtttgaatagtaaaacgccatttgct
accagtgacacagttgaccatcctgtatcactttacgctgcgaccaaaaaagccaatgag
ttgatggcacatagctattcgcacctttacgatatgccaaccaccggcctgcgttttttt
actgtatatggtagttggggccgccccgatatggcgccatttatctttactaaaaagatt
ttagagggtgaaaccattgatattaataacaatggtgatatgtggcgcgattttacccat
gtagacgatattgttgaaggggtgattcgtattgctgatgttattcccacacgaaatgat
gtctggactgtagaaacgggaacaccagcaagtagctccgcaccttatgcggtttataac
atcggccatggttcgccaattaatttaatggactttgttaaagctattgaagatgaatta
ggtattgtagcgaaaaagaactttcgcgagatgcagcctggtgatgtttatcaaacttat
gcggatacccaagacttatttgctgttacaggatatcaacctaaagttggcgtaaaagaa
ggcgtggctgagtttgttgcatggtatcgcaattatcaccggatttaa
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