Shewanella oncorhynchi: RA178_07615
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Entry
RA178_07615 CDS
T09381
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00521
Streptomycin biosynthesis
sog00523
Polyketide sugar unit biosynthesis
sog00541
O-Antigen nucleotide sugar biosynthesis
sog01100
Metabolic pathways
sog01110
Biosynthesis of secondary metabolites
sog01250
Biosynthesis of nucleotide sugars
Module
sog_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
RA178_07615 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RA178_07615 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RA178_07615 (rfbC)
Enzymes [BR:
sog01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
RA178_07615 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WMB74468
UniProt:
A0AA50Q7V0
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All DBs
Position
1671385..1671924
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AA seq
179 aa
AA seq
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MKYSETELAEVLVFEPQVFGDERGFFKETFRQSYFDACFTARGLEPPVFVQENQSRSQHN
VLRGLHFQRRKPQGKLVRVCAGSIFDVAVDIRADSATYGKWVGRVLSAENHLQMWIPPGF
AHGFYVLSDYADVIYQCTQYYDPEDESVLAWNCAEFAIDWPLIAAPILSTRDSIASTPS
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatagcgaaacagaattagccgaagtattggtgtttgaacctcaagtatttggt
gatgagcgtggtttttttaaggaaacgttcaggcaatcctattttgatgcttgttttact
gcaagaggacttgagcctcccgtatttgtgcaggaaaaccagagtcgttcgcaacacaat
gttctgcgaggcttgcattttcaacggcgaaaaccgcagggtaaattggtgcgggtctgt
gcagggagcatttttgatgttgccgtcgatattcgggctgactcggccacctatggaaaa
tgggttgggcgagtgctatcggcagagaatcatctgcaaatgtggatcccgccgggcttt
gctcacggtttttatgttctcagtgattatgctgatgttatttatcaatgtacccaatat
tatgatcctgaagatgaaagcgttttagcttggaactgtgctgagtttgccattgattgg
ccattaattgccgcaccgattttatccaccagagatagcatcgccagtacaccctcataa
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