Shewanella oncorhynchi: RA178_08165
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Entry
RA178_08165 CDS
T09381
Name
(GenBank) VWA domain-containing protein
KO
K07114
Ca-activated chloride channel homolog
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sog02000
]
RA178_08165
Transporters [BR:
sog02000
]
Other transporters
Pores ion channels [TC:
1
]
RA178_08165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_2
TPR_16
TPR_1
TPR_7
TPR_6
TPR_14
TPR_11
TPR_8
TPR_12
Motif
Other DBs
NCBI-ProteinID:
WMB74563
UniProt:
A0AA50KG64
LinkDB
All DBs
Position
complement(1794522..1796528)
Genome browser
AA seq
668 aa
AA seq
DB search
MSLHFIRPEWLLALVPLALALLSLWWQHESHSAWNRYIAPHLAKILVTQGNKKSRRPLHL
LALTWLIATLALAGPAVNKQSLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQAKFRATD
LLRNLKEGETGLVAFAGDAFTISPLTRDTGTLLNLLPTLSPEIMPVRGSNLAAGLTQAKT
LLAQGGHIRGDIILMTDGITTAQFDEANSALNGTQYRLAVVTFGTSQGAPIRLPDGQLQR
DSSNEVVVASTDFALLQKLAANNKGVLIQNRTDGNDLAQLQQWLSDAGDAKATDLDGETW
QDLGPYLALLLLLPALFSFRQGIVASVGFVTLAGSLLLAAAPQPAHASMWDNAWDNVWKT
TDQQAMQAYQSQDYANAAKQFESPQWRGSAQYKAGDYQQALKTFEQDSSAQGLYNQGNAL
MQLGKPDKAKERYQAALRKQADFPAAKANLELAEKLLQEQQQQQGKNEQQDKNQDQQGDQ
QSGDQQSGDQKSQDKQQSDQDSAQKDKQDQAGQKSQDQQDDADADQSPEQQKTDDQQSEQ
DKQNGNAQDKQNEAQQENEPVDNSPADNEAKMQAQAKADAEEQKSAEQEKQSVAAKEAPE
QNAQDKQEAAMSESVEAPPTNSEPLPAEMQRALRGVSEDPQVLLRNKMQLEYQKRRQNGQ
ISKDNEQW
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgagcctacattttattcgtcccgaatggctactcgccctagtgccgctagccttagcc
ttgttgagtttatggtggcaacacgagagccacagcgcttggaatcgttatattgcgccg
cacttagccaagatattggtcacccaaggcaataagaaatcccgccgtccgttgcattta
ttagccttaacttggttgattgcgaccttggcactcgccggacctgccgtgaataaacaa
tccttacctgtgtttgccgcagagcaaggccgcgtactggtgatggacatgtccgtatct
atgttcgccaccgatcttgcgccgaatcggttaacccaagccaaatttagggcaacggat
ctcctgcgtaatcttaaagaaggtgaaacaggtttagtcgcctttgcaggcgatgccttt
actatcagcccattaacccgtgataccggcacattactcaatttactgccgacgttaagt
cctgagattatgcccgttcgtggttcaaacttagcggcaggcttgacccaagccaaaacg
ctactggctcagggtggccatattcgcggtgatattatcctgatgacagatggcatcaca
acagcccagtttgatgaggctaactcggcattaaatggcacgcaatatcgcctcgccgtc
gtcacttttggcaccagccaaggcgcgccaatccgtctacccgatggacaattacaacgc
gacagcagcaacgaagtcgttgtggccagcactgatttcgctctgctgcaaaaactggcc
gcgaataacaaaggcgttctgatccagaatcgcaccgacggtaatgatctcgcccaatta
cagcaatggttaagcgatgctggcgatgcgaaagccacagatcttgatggtgaaacttgg
caggatctcggtccttacctcgccttattattactgctacccgcccttttcagctttaga
caaggaatcgtggccagtgttggatttgtcactcttgctggcagcttactgctcgcggct
gcgcctcagcctgcccatgccagtatgtgggacaatgcctgggacaatgtgtggaaaacc
acagatcaacaagcgatgcaggcctatcaatcccaagattacgcaaacgccgctaagcag
tttgagtcgccccaatggcgaggcagcgcccaatacaaagccggtgattaccagcaagca
ctaaaaaccttcgagcaagatagctcagcccaaggcctctacaatcaaggcaatgcattg
atgcaactcggtaaacccgataaggccaaggagcgctatcaagccgcacttagaaaacaa
gccgatttccctgcggcgaaggccaaccttgaactggctgaaaagttattgcaagaacag
caacaacagcaaggtaaaaacgagcaacaggataagaaccaagatcaacaaggcgatcag
cagtctggcgaccaacaatccggtgaccaaaaatcgcaggataaacagcaatctgaccaa
gatagcgctcagaaagataagcaagatcaagcgggacaaaagtctcaggatcaacaggac
gatgccgacgcggatcaaagccctgaacagcaaaaaacggatgatcaacagtctgagcaa
gataagcaaaatggcaatgctcaggacaagcagaatgaagctcagcaggaaaatgagcct
gtagacaattcacctgcagacaatgaagctaagatgcaagcgcaggctaaagccgatgct
gaagagcaaaagtcagctgagcaagaaaagcaaagcgttgccgccaaagaagctcctgag
caaaatgcgcaagataaacaagaggctgctatgagtgaatcggtagaggcaccgccaacc
aatagcgagccactgcccgcagaaatgcagcgagcactgaggggcgtgagtgaagacccg
caagtgttactgcgcaacaagatgcagttggaatatcaaaaacgccgtcaaaatggccaa
atatcaaaggataacgaacagtggtga
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