Shewanella oncorhynchi: RA178_08195
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Entry
RA178_08195 CDS
T09381
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00071
Fatty acid degradation
sog00280
Valine, leucine and isoleucine degradation
sog00310
Lysine degradation
sog00362
Benzoate degradation
sog00380
Tryptophan metabolism
sog00410
beta-Alanine metabolism
sog00640
Propanoate metabolism
sog00650
Butanoate metabolism
sog00907
Pinene, camphor and geraniol degradation
sog00930
Caprolactam degradation
sog01100
Metabolic pathways
sog01110
Biosynthesis of secondary metabolites
sog01120
Microbial metabolism in diverse environments
sog01200
Carbon metabolism
sog01212
Fatty acid metabolism
Module
sog_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RA178_08195 (fadJ)
00650 Butanoate metabolism
RA178_08195 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
RA178_08195 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RA178_08195 (fadJ)
00310 Lysine degradation
RA178_08195 (fadJ)
00380 Tryptophan metabolism
RA178_08195 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RA178_08195 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RA178_08195 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RA178_08195 (fadJ)
00930 Caprolactam degradation
RA178_08195 (fadJ)
Enzymes [BR:
sog01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RA178_08195 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RA178_08195 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RA178_08195 (fadJ)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LSDAT_euk
LEM
Motif
Other DBs
NCBI-ProteinID:
WMB74569
UniProt:
A0AA50KGN7
LinkDB
All DBs
Position
1801701..1803821
Genome browser
AA seq
706 aa
AA seq
DB search
MEKTFNLTRRDDGIAILTMDVPGETMNTLKAQFGPEISEILAEIKSDPHIRGLVLISGKK
DSFVAGADISMLDACKTAGDAKALSQQGHVVFNELEALKIPVVAAIHGACLGGGLELALA
CHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKM
GLVNDVVPQTILLQTAVEMALAGKRAPKPVKKSLVNQVLEGTSFGRNIIFDQATKQVEKK
TQGNYPAPAKIIDCVRQGIAKGMQKGLEVEASHFAELVVSKESEALRSIFFATTEMKKET
GAEGATPRKVKKAVILGGGLMGGGIASVTTTKAKIPVRVKDISEKGLSNALAYAYKLLDK
GVKRRHMTPAARDNLMALMTTTTEYKGVKDADIVVEAVFEDLALKHQMVKDIERECGEHT
IFASNTSSLPISQIAEAATRPENVIGLHYFSPVEKMPLVEVIAHAKTSPETIATTVAFAR
KQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHLDKALVKFGFPVGPITLLDE
VGIDVGAKISPILEKELGERFKAPAAFDKLLGDDRKGRKNGKGFYQYGASSKKAKAVDES
VYGVLGIKPSTNKDVKVVAERCVVQMLNEAVRCLDDGIIASPRDGDIGAIFGIGFPPFLG
GPFHYIDTLGAANLVKILEGYQSQFGNRFEPCERLKTMAQENAHFF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacctttaatttgacccgccgcgacgacggtattgccattttgactatggat
gttcctggcgaaaccatgaacaccctaaaagcacagtttggccctgaaatcagtgagatc
cttgctgagattaaaagcgatcctcatattcgtggacttgtgctgatctctggcaaaaaa
gactctttcgtcgcaggcgcggatatttctatgctcgatgcctgtaaaacggcgggcgat
gccaaagccttatcccagcaaggacatgtggtttttaatgagttagaagcgttaaaaatt
cctgtggttgcggcaatccatggtgcctgtttaggtggtggcttagagttagccttggct
tgtcatcaaagggtatgtagcgacgatggtaaaaccatgctcggcgtaccggaagttcaa
cttggcttattacctggcggcggtgggactcaacgtttgcctcgtttagtcggcattacc
accgccttagacatgatgttgaccggtaaacaaatccgtcctaaacaagccttgaaaatg
ggcttagttaatgatgttgtaccgcagaccattttgctgcaaaccgcagttgagatggcg
cttgctggtaaacgtgcaccgaaacctgttaaaaagtcactcgttaatcaagtgcttgaa
ggcacgagctttggccgtaacattattttcgatcaagcgactaaacaagtcgaaaagaaa
acccaaggtaattatcctgcaccagccaagatcattgactgcgtgcgtcaagggattgcg
aaggggatgcaaaaagggctagaagtcgaagcgagtcactttgccgaattagtggtatca
aaagaatctgaagcgctgcgcagtatttttttcgccaccactgaaatgaagaaagaaact
ggcgcagagggtgcaacgccgcgtaaagtgaagaaagcggtgatcttaggtggtggttta
atgggcggcggcatcgcctctgtgacgaccactaaggctaaaatccccgttcgcgtcaaa
gacatcagtgaaaaaggtttaagcaatgcattagcctacgcttataagttgttggataaa
ggggtaaagcgccgccatatgacgcctgctgcccgtgacaacttaatggcgttgatgacg
acaaccactgagtataaaggcgttaaagatgccgacatcgttgtggaagcggtatttgaa
gacttagcgcttaagcatcaaatggtgaaagacattgagcgtgagtgtggtgagcacacg
atttttgcgtcaaacacctcatctttgccgattagccaaatcgccgaggcggcgacgcgt
cctgaaaatgtgattggtctgcattatttctcgccagtagagaaaatgccgctggtggaa
gtgattgctcacgctaaaacgtcgccagaaaccattgcgactactgtcgcatttgcccgt
aagcaaggtaaaacaccgatagtggtacaggatggcgcgggtttctacgtgaaccgtatt
cttgcgctctacatgaacgaggccgcgcaattactactcgaaggccaaagtgttgagcat
ttggataaagccttagtgaaatttggcttccctgtgggacctattactttactcgacgaa
gtgggtatcgacgtgggcgcaaaaatttcaccaatcctcgaaaaagaattgggtgaacgt
tttaaagcgccagccgcattcgacaagcttttaggtgacgatcgtaaaggccgcaaaaat
ggcaaaggtttctatcaatacggcgcatcgagcaagaaagctaaagctgtcgatgagagt
gtttatggcgtgttaggcattaagcctagcaccaataaagatgtaaaagtggttgctgag
cgttgtgtcgtacaaatgctcaatgaagcggtgcgttgtttagatgatggtattattgcc
tcgccaagagacggtgatattggcgctattttcggtattggcttcccgccattcctcggt
ggcccattccattatattgacactttaggcgccgcgaacttagtgaagatccttgaaggt
tatcaaagtcaattcggtaacagattcgaaccttgtgagcgcttaaaaaccatggctcaa
gaaaacgcgcactttttctaa
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