Shewanella oncorhynchi: RA178_10900
Help
Entry
RA178_10900 CDS
T09381
Name
(GenBank) glycoside hydrolase family 15 protein
KO
K01178
glucoamylase [EC:
3.2.1.3
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00500
Starch and sucrose metabolism
sog01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RA178_10900
Enzymes [BR:
sog01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.3 glucan 1,4-alpha-glucosidase
RA178_10900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glucodextran_N
Glyco_hydro_15
Motif
Other DBs
NCBI-ProteinID:
WMB75078
UniProt:
A0AA50KHP1
LinkDB
All DBs
Position
complement(2403282..2405819)
Genome browser
AA seq
845 aa
AA seq
DB search
MESSPTPQQDLHTSQTRHAQTLTRRSRLALAVAASLLGIIGLAACSPTSNSATTATSVNA
APSVQQVAPGAPGKAPTWAFSGKTGIGTSYEPYTQGQYQDAKQNPISRVWFSLAQGILTE
TMYGLIHNAQLKELQFVVTGNGFVDTEKENTISSIEYLDTDANGRPQSLAYKIINKDVEG
KYQIEKHIFTDPDRDTLMMRVTFTAFEDGITPHLYVNPHIDNAGANDIGRIDTHTKNQAL
VAYTAAKDSSVMTVKSDLNFVQATTGFVGVSDGLADLADNGKLDTPYQTTSAQDKSTVGN
IAFTASYPTLIKAKPVTFNLAIGFGKDEPQSLANADASLAAGYDAVLSNYNTGWHDYLSS
LPAIANMANNTTDNGKLLYTSAMVLKAQEDKTYAGALIASLSNPWGDTVSAAVPSTGYKA
VWPRDFYQCAMAFLAMGDTQTPKVAFEYLKKVQVTEKTPGFTGTPGWFLQKTHVDGQIEW
VGVQLDQTAMPIMLGWKLWQAGVLTPDEISHWYQEMLKGAADFLISGGDVNLDWNHTQIT
PPKTQQERWEEQAGYSPSTTAAVIAGLVAASEIAKEAKDITSSARYLTAAKDLSNSLEKH
LVTTQGLLKNSADVSAPYYLRLSPNGEPNTRDTLAANNGKQGLDQRQILDGGFLELVRYG
VRGATDKLINQSLQLIDNTELEHNLRLKYEFTAKDGSTIPGFRRYGNDGYGEDTVTGKNY
AESGSNSADQRGRVWPFFTGERGHFELALAQAKGELTGNNAQQTKQQLINTYVQGMETFA
NAGMMLPEQAWDGVGDATRYHYQLGQGTNSATPLAWTHAEYIKLVRSMTDGQVWDYNPIV
PAALK
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgagtcctacgccgcagcaggatctgcacaccagccaaacccgtcacgcgcaa
acgttaacaaggcgcagccgcctagcgcttgccgtcgccgcaagcctattaggaataata
gggttagcggcctgttcacccacatcgaattcagcaacaactgccacaagtgtgaatgcc
gcgccaagtgtgcagcaggttgcgcccggcgcaccaggtaaagcgccgacttgggcattt
tcgggtaaaactggtattgggacgtcttacgagccttatacccaaggtcaatatcaagat
gctaagcaaaatcccattagccgcgtttggttctccctcgcccaaggtattttaaccgaa
accatgtatggtcttatccataatgcgcagctcaaagaactgcaatttgtggtcacaggt
aatggctttgtcgataccgaaaaagagaacaccatcagcagtatagaatatttagataca
gatgctaatggtcgaccgcaatcccttgcctataaaattatcaataaagatgttgaaggt
aagtatcagattgaaaagcatatctttaccgatccagaccgcgacactttgatgatgcgt
gtcacctttaccgcctttgaagatggcattacaccgcatttgtatgtcaatccgcatatc
gacaatgcgggcgccaatgatatcggccgcatcgacactcatacaaagaatcaggcgctg
gtggcctataccgccgccaaagacagtagcgtaatgacggtaaaatccgatctgaatttt
gtgcaggctacgactggctttgtcggtgtttccgatggcctagccgatttggccgataac
ggcaaactcgatacgccctatcaaacaaccagtgcgcaagataaatcgaccgtcggcaat
atcgcctttaccgcaagctacccaacgctcatcaaagccaaacccgtcacctttaatctc
gccatcggttttggtaaagatgaaccccagagtttagccaatgccgatgccagcttagcc
gcaggttatgatgctgtgctcagcaattacaacacgggctggcacgattacttaagctca
ctgcccgccatcgctaacatggccaacaacacgaccgataacggtaagctgctgtatacc
agtgctatggtcttgaaagcgcaggaagataaaacctatgcgggcgcacttatcgcctcg
ttatctaatccttggggcgatacggtttcggcagccgtgccgagcactggctataaagca
gtatggccgcgcgacttttaccaatgcgccatggcattcctcgccatgggtgacacgcaa
acgcccaaagtggccttcgaatacctgaaaaaagtgcaagtgaccgaaaagacgcccggc
tttacgggtacgcccggttggttcctgcaaaagacccatgtggatggccaaattgaatgg
gtcggcgtgcagctcgatcaaaccgccatgcctatcatgctcggctggaaactctggcaa
gcgggcgtactcacccctgatgagatcagtcactggtatcaagagatgctcaaaggtgca
gcggactttttgatcagcggcggtgacgtcaatctggattggaatcacactcaaatcacc
ccacctaaaactcagcaagaacgttgggaagaacaagcgggttactccccctcaacaacg
gctgccgtgatcgccggtcttgttgccgcgagtgaaattgccaaagaagctaaagatatt
acttcaagcgcccgttatcttaccgccgccaaagacttaagtaatagtttagaaaaacac
ttagtcaccacccaagggctattgaaaaacagcgcagatgtcagcgcgccttactattta
cgtttaagcccgaatggcgagccaaatactcgcgatacactggcggcaaataacggtaag
caaggtttggatcaacgtcagatcctcgatggcggatttttagaactagtgcgttatggc
gtgcgcggtgcaaccgataagctcatcaatcaaagccttcaattaattgataatacagag
cttgagcacaacctacgccttaaatacgagtttaccgccaaagatggcagcactatcccc
ggctttagacgttatggcaacgacggttacggcgaggatacggtgactggcaaaaactat
gcggaatctggcagcaacagcgccgatcaacgcggccgagtctggcccttcttcaccggc
gagcgtggtcattttgaattagcactcgcccaagcaaaaggcgagctaacaggcaataac
gcgcagcaaaccaagcagcagttaatcaacacctatgtgcaaggcatggaaacctttgcg
aatgcgggcatgatgttacccgagcaagcgtgggacggtgtcggcgacgccactcgctat
cattaccaactcggacaaggcaccaactctgccacaccgctcgcctggacccatgcagaa
tacatcaaactggtgcgctcaatgaccgatggccaagtctgggattataaccctatcgtc
ccagcggcattgaaatga
DBGET
integrated database retrieval system
