Shewanella oncorhynchi: RA178_12125
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Entry
RA178_12125 CDS
T09381
Name
(GenBank) alpha-amylase family protein
Organism
sog
Shewanella oncorhynchi
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
WMB71192
UniProt:
A0AA50KAP8
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Position
2688858..2691029
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AA seq
723 aa
AA seq
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MSFLSPIYSRVIQYPQAAKFPIVALLITQAAKAPQRRQSSLSLCLNALFSASLLTASLFS
FSINANTSTQTLDNELLPKSESEVMTLKPVVYQIFTRLYGNKNPTNKPWGTIADNGVGKF
NDINDIALNSIKDLGVTHVWYTGVPHHALIGDYSAIGVSADDPDVVKGRAGSPYAVKDYY
NVNPDLAVNPANRLAEFEALIARTHHHGLKVIIDIVPNHVARHYQSVSKPQGVRDFGEGD
DTSLEYAKNNNFYYVVDKVDVYNGSEGAKGKAHAFEVPSLPAGLKPLGGEARPLSDGKFN
EFPAKWTGNGSRLAKPDANDWYETVKINYGVRPDGTYDFPRLPANFATLTQAQHYAFWQQ
HLAELPSSWIKFNQIAQYWLAKGVDGFRYDMAEMVPVEFWSYLNSQIKHTNPDAFILAEV
YNPKLYRDYIQLGKMDYLYDKVDLYDTLKAVMAGKTSTANIAADQEKVQDIESHMLHFLE
NHDEQRIGNAAFLASLHTNKPTATQAVNPHYALPAMVVSATIGTSPTLVYFGQEVGEAAI
DNPGFGHASRTSIFDYVGVPAHQRWMNNGKFDGGQSTVKEATLRAYYQKLLNLSTGKNVP
ALLGEYYSLDAANRSAQTATMDTHGSATGYDDSTFAFVRFEENTTNKKDQKLIIVNNFNQ
TQAKPLSLKLPKPLIDQWQLTDGTYPLKDLLEDNKAQLVVKQGEGQVQMQLAPLSSAIFE
LED
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
ttgagctttttatcacctatctattccagagttattcagtacccccaagcggcgaaattt
cccatagtggctttacttataacccaagcagcgaaagccccgcagcgccgacagtcatca
ctcagcttatgtttaaacgctctattcagtgcctctttattaactgcctcgctttttagc
ttctcgatcaatgcaaatacatcaacgcagacgcttgataatgagttactaccaaagtct
gagagtgaggttatgacgcttaaacctgtggtgtatcaaatctttactcgcctttatggc
aataaaaatccaaccaacaaaccttggggcacgattgccgacaatggcgtcggcaagttt
aatgatatcaatgatattgcactcaatagtatcaaggacctaggcgttacccatgtgtgg
tacacgggcgttccccaccatgcattgattggtgattacagcgcgattggcgtgagtgct
gatgatcccgatgtggtcaaaggacgcgcgggctcaccctacgcagtcaaagattactac
aacgtcaacccagatctggcggtcaatcccgccaaccgtttagccgagttcgaagcgctc
attgcccgtacccatcaccacggcttaaaggtgattatcgatatcgtgccaaaccatgtg
gcgcgccattatcaatccgttagtaaaccccaaggcgtgcgcgattttggcgaaggtgat
gataccagtctggagtacgccaaaaacaacaacttctattacgttgttgataaagttgat
gtttataatggctcggagggggcaaagggaaaagcgcatgcctttgaagtgccaagctta
cccgcagggcttaaaccattgggcggagaagctcgccccttaagtgacggcaaattcaac
gaatttcccgcaaaatggactggtaatggctcacgcttagccaagcccgatgccaatgat
tggtacgagaccgttaaaatcaattacggcgtacgccccgatggcacctatgacttccct
cgcctgccagccaatttcgccactttaacgcaggcgcagcattacgctttttggcaacaa
cacttagccgagctcccaagctcttggattaaattcaatcagattgcccagtattggcta
gcgaaaggggtcgatggctttcgctatgatatggcagaaatggtaccagtggagttttgg
agctatctcaacagccagataaaacacacaaatcccgatgcctttatcttggccgaggtc
tataaccctaagttgtaccgagattatatccaacttggcaaaatggattatctgtacgat
aaggttgacctttacgacaccctaaaagccgtgatggcgggtaaaaccagcacagctaat
atcgcggcagatcaggaaaaagtgcaggatattgaatctcacatgctgcactttttagaa
aaccacgacgagcaacgtattggtaatgcggcatttttagcatcgctacacacaaataag
cccacggcaacccaagccgtgaatccacactatgccctacccgctatggtagtgtcggca
acgataggcacttcaccgacgttagtgtattttggccaagaagtgggagaagccgccatc
gacaacccaggatttggtcatgcatcacgcaccagtatttttgactatgttggcgtccct
gcccatcagcgctggatgaacaatggcaagtttgatggtggacaatcaaccgtaaaggaa
gccactttgcgggcttattatcaaaaattactgaacctaagcacaggtaaaaatgtacct
gcgctcttaggagaatattactcgctcgatgccgccaaccgcagcgcacaaaccgccaca
atggatactcatggcagtgcaacgggttatgatgacagcacttttgcctttgtgcgcttt
gaggaaaatacgaccaataaaaaggaccaaaaactgattattgtgaataactttaatcaa
actcaagcaaagccattatcccttaagctaccaaagccacttatcgaccaatggcagtta
acggatgggacctatccacttaaggatttgctggaagacaataaagcgcagttggttgtc
aaacaaggtgaaggacaagttcagatgcaacttgcaccgctgtcttcagccatattcgag
ctggaagattaa
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