Shewanella oncorhynchi: RA178_13645 Help Entry RA178_13645       CDS       T09381                                  Name (GenBank) DEAD/DEAH box helicase   KO K19789   DNA repair protein RadD Organism sog  Shewanella oncorhynchi Brite KEGG Orthology (KO) [BR:sog00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sog03400]     RA178_13645 DNA repair and recombination proteins [BR:sog03400]  Prokaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factor      RA178_13645 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ResIII Helicase_C DEAD SWI2_SNF2 AAA_30 AAA_22 AAA_16 Helicase_C_2 DZR zf-ribbon_3 SLFN-g3_helicase zf-tcix AAA UPF0547 ERCC3_RAD25_C SNF2-rel_dom DUF2987 DUF3530 DZR_2 Motif Other DBs NCBI-ProteinID:  WMB71479 UniProt:  A0AA50KAR7 LinkDB All DBs Position 3027400..3029154 Genome browser AA seq 584 aa AA seqDB search MSVKLRDYQQQAVNAAIAHFRQSQASAVLVLPTGAGKSIVIAELARIAKGRVLVLTHVKE LVAQNAEKVGLLTAQASIYAAGLNQKATEGKTVVASIQSAARGLTQFDQPFSLVIIDECH RVSLEKTSQYQQVLNHLRTKNPQLRLLGLTATPYRLGTGWIYQQHYHGKVGSPEHAVFEH CVFELPIRPLIKQGYLTAPTLFDGLSAQYDFSQLKANENGEYAEAEVNDLLGHYGRATTA IVKQLIELSQHRKGIIIFAATVRHANEIFGQLNQAHAAQSAIITAQTHDNERDATIERFK AQELKFLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMIGRGLRIAEGKKDCLIIDYA ANGYDLYFPEVGQAKPNSKSVPVQVHCPVCDFANIFWGLTDDDGDIIEHFGRRCQGIVEQ QGKKLQCDFRFRSKSCPDCGEENDIAARICQHCQSTLIDPDKRLRQVLSLQHHHLFRCQH MSLIDDGGNLKVQYLDIDGNEFNRRFKLQTPAQWRALYALFIFPHSRTPGLKPKKYTKVT ELISDADKFRMPDLLLLKKHKKGWDLLESYFDYQGRYQTENKRG NT seq 1755 nt NT seq  +upstreamnt  +downstreamnt gtgtcagtcaaactcagagactatcaacagcaagcggttaatgccgccatcgcccatttt aggcaaagccaagcttccgccgtactcgtattacccacaggcgccggcaaaagcatagtg atcgccgaactggcacgcatcgccaaaggcagagtattagtgctcacccatgtgaaagaa ttagttgcacaaaatgccgagaaagtcggcctcctcaccgcacaagccagtatctatgcg gcggggcttaatcaaaaagccacagaggggaaaaccgtcgttgccagtattcaatcggcg gcgcgggggttaacccagttcgatcagccgttctcgttagtcattattgatgaatgccac agagtcagcctagaaaaaaccagccaatatcagcaagtactcaaccatttacgcacgaaa aatccccaattaagattgctcggtctcaccgccacaccctatcgccttggcactggctgg atttatcagcaacactatcacggcaaagtggggtctcccgaacatgccgtgttcgaacat tgtgtgtttgagctacccatcaggccgctcattaagcaaggttacctcacagcgccaacc ctgtttgatggcctaagtgcccagtacgacttcagccaacttaaagcaaacgagaatggc gagtatgccgaagccgaggttaacgatttactgggacattacggccgcgcgaccactgcg attgtgaaacaactcattgaactgagccaacatagaaaaggcattatcatttttgcggca acggtgcgccacgctaatgagatttttggccaactcaaccaagctcacgctgcacaaagt gccattatcacagcacaaacgcacgacaatgaacgtgacgcgacgattgaacgctttaaa gcccaagagcttaagtttttagtcaacgtggctgtgttgacgacaggcttcgacgcgccc catgtggatttgattgcaattttgcgccctaccgcctcagtcagtctgtttcaacaaatg atcggccgtggattgcgaatcgctgaaggcaaaaaagattgtcttatcatcgactatgct gccaatggttatgacttgtatttccctgaggtcggccaagctaaacccaacagtaaatcg gtccccgtgcaagtgcattgcccagtatgcgattttgccaatatattctggggactcacg gacgacgatggcgacattatcgaacactttggtcgccgctgtcagggcatagtcgaacag caaggtaaaaagctgcagtgcgactttcgatttagatctaaatcttgccctgattgcggc gaagagaatgatatcgcggcgcgcatttgccagcactgccaatcgaccctcatcgatccc gataaacgcctacgccaagtgctcagcctgcagcaccatcatttattccgctgccagcat atgagcctcatcgacgatggcggcaatctgaaagtgcagtacctcgatatcgacggtaat gaattcaatcgccgctttaaattacaaacaccggcccagtggcgagccctatatgcctta ttcatctttccccatagccgtacaccgggattaaaaccgaaaaaatacactaaggtgaca gagttaatcagcgacgcggataaattccgcatgcccgatctcttgctgctgaagaaacat aaaaaaggctgggatctgctcgaaagctattttgattatcaaggtcgctatcaaactgaa aataaacgtggctga

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