Shewanella oncorhynchi: RA178_19065
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Entry
RA178_19065 CDS
T09381
Symbol
rsgA
Name
(GenBank) small ribosomal subunit biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00730
Thiamine metabolism
sog01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RA178_19065 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sog03009
]
RA178_19065 (rsgA)
Enzymes [BR:
sog01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
RA178_19065 (rsgA)
Ribosome biogenesis [BR:
sog03009
]
Prokaryotic type
GTPases
RA178_19065 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
GTP_EFTU
FeoB_N
AAA_29
MMR_HSR1_Xtn
IIGP
nSTAND1
AAA_23
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WMB72492
UniProt:
A0AA50KCH6
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All DBs
Position
4292262..4293326
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AA seq
354 aa
AA seq
DB search
MSKKKPLSQGQLRRMRANHEKRLNRDSGDKNTPELQDSSLGQEQPGTVISRFGQHADIET
ESGQIVRCNIRRAVTSLVTGDKVIVRLAIESQANSGIAGIVEAVHPRRSSLTRPDLYDGV
KIIASNIDQILIVSSVLPSFTTQIIDRYLVAAEDTDIPPIIILNKIDLLNPDEAQAIDEA
LQRYKDIGYPVYKVSSKLGDGIDTIKGILKDKVSVFAGQSGVGKSSIINALLPDAELIIG
DVSDNSGLGQHTTTTAKLLHLPSGGDLIDSPGVREFALWHLPAQRVGWCFIEFREYLGAC
KFRDCKHGDDPGCALQEALSQGKISADRFNNYHKIIASLDEQRHARHFRAATDE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaaagaaacccctaagccaaggtcaattacgccgtatgcgcgctaatcacgag
aagcgactcaatcgtgacagtggcgataaaaatacgccagagttacaggatagttcattg
gggcaagaacagcccggtactgtgatttcacgttttggccaacatgccgacatagaaact
gaaagcggccaaattgtgcgctgtaatattcgccgtgccgtcaccagtttagtgactggc
gataaagtgatcgtacgcttagccattgagagccaagccaatagcggtatcgcaggtatt
gttgaagccgttcatccacgtcgctcatcacttacacgcccagatttatacgatggcgtg
aaaatcatcgcctcgaatatcgaccaaattttgattgtctcctcggtattacccagcttt
accacccagatcattgaccgttatttagtggctgccgaagataccgatattccgcctatc
atcattttaaataaaattgacttgctcaatcccgatgaagcgcaggcaatcgatgaagcg
ctacagcgctacaaagacattggctatccggtttataaggtcagcagcaagcttggcgat
ggtatcgataccatcaaaggcatactcaaagataaagtcagcgtgtttgccggccaatct
ggtgtgggtaaatcatcgatcatcaatgcattactacccgatgcagagcttattatcggc
gatgtttccgataactcaggtttaggtcaacacactactaccactgctaagctgttgcac
ttgcctagtggcggcgatttaatcgactctccgggcgtgcgcgaattcgccctatggcat
cttcctgcacaacgtgtcggctggtgctttatcgagtttcgcgagtatcttggcgcatgt
aaattccgcgattgtaaacacggtgacgatcccggctgtgcacttcaagaagccctgagc
caaggtaagatcagcgcagatcgctttaataattaccataaaattatcgccagcttagat
gaacaacgtcatgcccgccatttccgtgcggccactgatgaataa
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