Shewanella oncorhynchi: RA178_20895
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Entry
RA178_20895 CDS
T09381
Symbol
fdh3B
Name
(GenBank) formate dehydrogenase FDH3 subunit beta
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
sog
Shewanella oncorhynchi
Pathway
sog00630
Glyoxylate and dicarboxylate metabolism
sog00680
Methane metabolism
sog01100
Metabolic pathways
sog01120
Microbial metabolism in diverse environments
sog01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RA178_20895 (fdh3B)
09102 Energy metabolism
00680 Methane metabolism
RA178_20895 (fdh3B)
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Gene cluster
GFIT
Motif
Pfam:
Fer4_7
Fer4_11
Fer4_10
Fer4_9
Fer4_6
Fer4
Fer4_2
Fer4_21
Fer4_8
Fer4_3
Fer4_16
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
WMB72824
UniProt:
A0AA50KCS4
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All DBs
Position
4744812..4745408
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AA seq
198 aa
AA seq
DB search
MAVMKFLCDTKRCIECNGCVTACKNENDSALEWGIQRRRVVTINDGLPGEASISVACMHC
TDAPCMAVCPADCFYRTEDGIVLHNKDTCIGCGYCFYACPFGAPQFPKKTAFGSRGKMDK
CTFCAGGPEETFSEAERKKYGANRIAEGKLPMCAELCSTKALLAGDAEVVSNIYRQRMAS
RGNPNVIWGYNPKTGEIN
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcatgaaatttctgtgtgacaccaagcgctgcatcgagtgtaacggttgcgtc
actgcatgtaagaacgaaaacgactccgctctcgagtggggaattcaacgtcgccgcgtg
gtgacgatcaacgatggtctacctggcgaagcctcaatttcagtagcttgtatgcactgt
actgacgctccctgcatggccgtatgtccggcagattgtttctaccgcaccgaagacggc
atagtgctacacaacaaagatacttgtatcggttgtggttattgcttctatgcttgtcca
tttggtgcaccgcaattcccgaaaaagactgcctttggtagtcgtggcaaaatggacaag
tgtactttctgtgccggtggcccagaagaaaccttctccgaagctgagcgtaaaaaatac
ggtgctaaccgtattgctgagggcaagttacctatgtgtgctgagctttgttctactaaa
gcgctgctcgcaggtgatgcggaagtggtatcaaacatttaccgtcaacgtatggcctct
cgaggcaatcctaacgtgatttggggttacaaccccaagacaggtgagattaactaa
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